| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0074 |
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| Symbol | pnp |
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| ID | 3514162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 83907 |
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| End bp | 86009 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637668758 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_263382 |
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| Protein GI | 71064655 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.983734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATGT TTAATACCAT TAAGCGTGAA TTTCAATACG GCAACCAGCA AGTTGTCATC
GAAACAGGGC GTATTGCTCG CCAAGCAAAC TCTATTTTAG TACACATGGG CGGCGTTACT
GTGTTGGTAG CAGCGGTTGT AAAGTCTGAT GCCAAAGAAG GTCAAAACTT CTTTCCATTG
ACTGTCAACT ACCAAGAAAA AATGTACGCT GCAGGTAAAA TTCCAGGTGC TTATGGCAAG
CGTGAAGGTC GTGCAAGCGA GTCTGAAACC TTAACGTCGC GTCTGATTGA CCGCCCAATC
CGTCCGCTAT TCCCTGAAGG CTATGTAAAC GAGATTCAAA TCACAGCGAC GGTTGTATCA
TCTGATAAAA CTCAATCAGC AGATATCGCA GCATTAATCG GTGCTTCAGC GGCGCTAGCT
ATCTCTGATG CCCCATTCAA TGGTCCTGTT GCTGCCGCCC GTGTTGGTTT TATCAATGGT
GAGTACGTAC TGAACCCTAC TCTTGAAGAG CTTAAAGAAA GTGATCTTGA TTTGGTCGTG
GCTGGTACAA AGTCTGCCGT ATTGATGGTT GAATCTGAAG CTGCAGAGTT ATCAGAAGAT
CAAATGCTAG GCGCAGTATT ATACGGTCAT CAGCAGCAGC AAATCGTTAT CGATAACATT
GCCTCAATGG CAGCAGAAAT TGGTACTGCT AAGCAGCAAT ATACCGCTCC TGTACGTGAT
CAAGCGTTAG AGACTGGTAT GAAAGAGCAG TTTGGTGCGC AAGTATCTGA TGCTTATACG
ATTACTGATA AGCAAGCTCG CTACAGCAAG CTTAACGAAA TTAAAGACGC CGCTATTGTA
GCCCTTGCTG GCGATGCTGA ATCAGAAAGC TATAGTGATA CAGTATCTGA GTTAAAAGAG
ATTTATAACG ATCTAAAATA TCGTACCGTT CGTGACAATA TTTTGTCTGG TAAGCCACGT
ATTGATGGTC GTGATTTAGA GACCGTTCGT GCTCTTGATG TACAGGTTGG TGTACTACCA
TTTACTCATG GTTCAGCACT GTTTACACGT GGTGAAACCC AAGCCTTGGT AACGACTACC
CTTGGTAATA CTCGTGACGT CAATATGATT GACTCGCTAG CGGGTACGAT TCGTGACCAT
TTCATGTTGC ATTACAACTT TCCGCATTTC TCAGTAGGCG AAACGGGTCG TGAAGGTATT
CCTAAACGTC GCGAAATTGG TCATGGTCGT CTAGCACGCC GTGGTGTACA AGCGATGCTG
CCTGATAGCG ACCGCTTCCC GTATGTCATC CGTGTGGTAT CTGAGATCAC TGAATCAAAC
GGTTCATCAT CAATGGCTTC TGTTTGCGGC GCGAGCTTGG CATTGATGGA CGCTGGTGTA
CCAATTAAAG CACCAGTTGC TGGTATCGCC ATGGGTCTGG TCAAAGAAGG CGAGCGTTTC
GCGGTATTGT CTGACATCTT AGGTGATGAA GATCATCTTG GCGATATGGA TTTTAAAGTT
GCTGGTTCTA AAGATGGTAT TACTGCCCTG CAGATGGATA TTAAAATTGA AGGTATTACA
CCAGATATCA TGGAGCAAGC GTTAAAACAA GCCCATGCTG GTCGTATTCA TATCCTAGAC
GCGATGAACA AAGTATTGCC TGAGAGCCGT ACTGAAATCA ATGCTCATGC GCCTAATTAT
GCAGTAATTG AGATCAATCC AGACAAAATC CGTGACGTTA TCGGTAAAGG TGGCGCGACG
ATTCGTCAGC TAACTGAAGA AACTGGTGCG GTTATTGATA TCGATGATGC GGGTACTATT
CGTATCTTTG GTGAAAACAA AGCGGCAACT AAAGCAGCGA TTGCTAAAAT CGAAGCAATC
ACGGCAGAAG TTGAAGTGGG TAAAACCTAT GAAGGTACGG TCGCTCGTAT CGTCGACTTC
GGTGCTTTTG TTAACGTATT ACCAAATACT GATGGCCTCG TCCATATCTC ACAAATCGCT
GATGAGCGCG TAGAAAACGT TTCTGACTAT CTAAAAGAAG GTCAAATCGT GAAAGTACTG
GTACAAGACG TTGATAATCG TGGTCGTATC AAGTTGACTA TGAAAGGTAT TGAGCAAAGC
TAA
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| Protein sequence | MTMFNTIKRE FQYGNQQVVI ETGRIARQAN SILVHMGGVT VLVAAVVKSD AKEGQNFFPL
TVNYQEKMYA AGKIPGAYGK REGRASESET LTSRLIDRPI RPLFPEGYVN EIQITATVVS
SDKTQSADIA ALIGASAALA ISDAPFNGPV AAARVGFING EYVLNPTLEE LKESDLDLVV
AGTKSAVLMV ESEAAELSED QMLGAVLYGH QQQQIVIDNI ASMAAEIGTA KQQYTAPVRD
QALETGMKEQ FGAQVSDAYT ITDKQARYSK LNEIKDAAIV ALAGDAESES YSDTVSELKE
IYNDLKYRTV RDNILSGKPR IDGRDLETVR ALDVQVGVLP FTHGSALFTR GETQALVTTT
LGNTRDVNMI DSLAGTIRDH FMLHYNFPHF SVGETGREGI PKRREIGHGR LARRGVQAML
PDSDRFPYVI RVVSEITESN GSSSMASVCG ASLALMDAGV PIKAPVAGIA MGLVKEGERF
AVLSDILGDE DHLGDMDFKV AGSKDGITAL QMDIKIEGIT PDIMEQALKQ AHAGRIHILD
AMNKVLPESR TEINAHAPNY AVIEINPDKI RDVIGKGGAT IRQLTEETGA VIDIDDAGTI
RIFGENKAAT KAAIAKIEAI TAEVEVGKTY EGTVARIVDF GAFVNVLPNT DGLVHISQIA
DERVENVSDY LKEGQIVKVL VQDVDNRGRI KLTMKGIEQS
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