| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0063 |
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| Symbol | pilC |
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| ID | 3514149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 69402 |
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| End bp | 70625 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637668745 |
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| Product | pilin secretion/fimbrial assembly system protein, PilC |
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| Protein accession | YP_263371 |
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| Protein GI | 71064644 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000657868 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAG CTAAGACCGA CATGCTGTTA GACTTTGTCT ATGATGGGGT CAACCGGCGC
GGGCAAAAGG TAAAAGGTGA GACCACCAGT CATAGCTTAG AGCTTGCCAA AGCCACATTG
CGCAAACAAG GTATCACGGT TAAAAGTATC AAGAAAAAGC CAAAACCCTT ATATAGCTTT
AAAAAACCCA TCAAGCCTAT CGATATTGCT ATTTTTGCGC GTCAATTGGC AACGATGATG
AAAGCTGGGG TGCCATTGAC CCAATCCTTT GAAATTGTTG CTGACTCTCT CGATAACCCA
AGTATGAAAG ATTTGGTTTT ACAAATCAAA GCCGATATTG AAGCTGGTGG CAACTTTGCT
TCAGCATTAC GCAGGCATCC ACGATATTTT GATGACCTTT TTTGCTCGCT TGTCGATTCT
GGTGAGCAGT CAGGTGCGTT AGAAACCATG TTAGAGCGGG TTGCGACGTA TAAAGAAAAA
AGCGAGCTGC TCAAAGCTAA AATCAAAAAA GCCATGAAAT ATCCTATCGC GGTCGTTGTA
GTCGCTATCA TTGTGACCAT CATTCTGCTC GTTAAAGTCG TTCCAGTATT TGCTGATTTA
TTTGGCTCTT TTGGCGCAGA GCTACCTGCT TTTACGCAGA TGGTAGTAAG TATGTCTGAG
TGGATGCAAG CGTGGTGGTT CATGTTAATT GTGTTTATCG GTGGCGCTAT TATCGGATTT
TCAGAAGCTA AGAAGCGCTC AAAGAAATTT CGCGATTTCT TAGACCGTGT GGCATTAAAA
GCCCCGATAT TTGGTAATAT CGCTTACCAA GCTGTTATTG CGCGTTTTGC TCGCACTTTG
TCTACCACTT TTGCTGCTGG CGTACCACTT ATTGATGCTC TGGACTCTAC TGCGGGCGCG
GCAAATAACG TGGTGTTTTA TAACGCGATT CAGCAAATCA AAAATGACGT CTCTACAGGG
CAACAATTAC AGTTCTCCAT ACGCTCAACC AATTTATTTC CAAGCCTTGT CATTCAAATG
GTTGGTATCG GTGAAGAGTC TGGTAGCTTG GAAGACATGC TCGATAAAGT AGCGATCTAC
TATGAAAACG AAGTCGATAA CGCGGTTGAT GGTTTGACCA GCTTGATGGA GCCGCTTATT
ATGGCGGTAC TTGGCGTATT AGTCGGTGGC TTGGTCATTG CCATGTACCT ACCAATTTTT
CAAATGGGCT CAGTGGTAGG CTAA
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| Protein sequence | MAKAKTDMLL DFVYDGVNRR GQKVKGETTS HSLELAKATL RKQGITVKSI KKKPKPLYSF
KKPIKPIDIA IFARQLATMM KAGVPLTQSF EIVADSLDNP SMKDLVLQIK ADIEAGGNFA
SALRRHPRYF DDLFCSLVDS GEQSGALETM LERVATYKEK SELLKAKIKK AMKYPIAVVV
VAIIVTIILL VKVVPVFADL FGSFGAELPA FTQMVVSMSE WMQAWWFMLI VFIGGAIIGF
SEAKKRSKKF RDFLDRVALK APIFGNIAYQ AVIARFARTL STTFAAGVPL IDALDSTAGA
ANNVVFYNAI QQIKNDVSTG QQLQFSIRST NLFPSLVIQM VGIGEESGSL EDMLDKVAIY
YENEVDNAVD GLTSLMEPLI MAVLGVLVGG LVIAMYLPIF QMGSVVG
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