Gene Psyc_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0058 
SymbolrecN 
ID3514623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp64062 
End bp65741 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content48% 
IMG OID637668740 
ProductDNA repair protein 
Protein accessionYP_263366 
Protein GI71064639 
COG category[L] Replication, recombination and repair 
COG ID[COG0497] ATPase involved in DNA repair 
TIGRFAM ID[TIGR00634] DNA repair protein RecN 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGTAT CATTAACTTT ACATCAGTTT GCATTAATCG CCCAGCATGA GCTGAGTGTG 
GCTGAAGGCT TCAATGTCAT CACTGGTGAG ACGGGTGCTG GCAAATCGCT ATTACTCGAT
GCGCTGTCTT TATGTGTCGG CGAGCGCGCA GACATGGCGA TGGTCAGACA TGGCGCGGCG
CACGCGGATA TATACGCGCA ATTTGATGTA GAAAACAACC CCGTCATTGC TGAATGGTTT
GCCAAAAATG AGCGCGCGCT AGAAGAGCCA GAAGTATTGA TTCGTCGGCA ACTCAATAAT
ACAGGACGCT CAAAAGCTTG GTTAAATGGA ACACCTGTCA GTTTGGCTGA ACTCAAAAGC
TTAGGGTCAT TGCTGGTCAA TATTCATAGT CAGCACGCGC AGCAAGCGTT GCTCAAACCG
CAGTTTGTGG TGCAATGGTT AGATGAAATG GCACAGATAA CTTCTCTTAC TACGAAAACT
ACCAGTAGCT ATCAGCAGTA TCAGCAGCTC AAACGCCGTG CTGACGATCT TGCTAGCCGT
GAAGCGCAGC GCCAAGACCG TATTCAACTT CTACAAAGCC AGCTGGCAGA TATCGCACCG
TTATTGGTCG TTGACTATGC AGAAGTAGAA GCGGAGCATG AAGAACTATC CAATATTGAA
GCGCTGATGA TCGAGGCCAG TCATGGCTTG CATCTGCTCG ATAATGATAC CGATGAACCA
GATGTCATGA CCTTGCTCGG GCAAGCGATT AAGCTATGCG ATAATCAGAT GAGCGTTAGC
CAAACCTTTG AGCAAGCTTC AGAACAGCTG CATTTGGCGC AGCAGCAAAT TACTGAAGTG
ACCAGCTTGT TGTCAGATTA TGCTGAGCAG CAACTGCCTG ACCCTGAGCG CTTGCAGTCA
TTAGACAGTT TAATCAGCTT AGGTCATCGC CTGTCACGTA AGCACAACCT GCCAGCCAAC
GACTTAATTA ATGAAGCCAA AGGGTGGGAA GCGCAATTAG AACAGTTAGA AAACGAGCCA
AGCAGTGATG CAATGGCGGT GCAAATCGAG CAAGCATGGC AAGAATATAT AGCACTAGCA
ACTGAGCTAA ATAAAGAACG CTCTAAAGCC GCACCGATTG TCAGCAAACA GCTGATTAAG
CAATTACAGC CGCTTGCCCT GCCCAATGCA CGCTGCGAGT TCGTATTTAC CAAAAAGACC
GATGTCAGCC AATATAATGG GCAAGGCTGT TATGATATCG ACTTATTATT TAGCGCCAAC
GTCGGTATGC CGATGCAACC GCTGCATAAA ATCGCTTCAG GCGGCGAGCT GTCACGTATG
GCGCTGGTGA TGCAGGTCTT GCAAGCGACC AATGCTGATA ATAATGCGGC AAAACCTATG
CTGGTCTTTG ACGAGGTTGA TGTCGGTATC AGTGGTGGTA CGGCACAAGT TGTCGGTGAG
CTATTGCGTG CACTTGGGCA AACTCAGCAA TTACTCGCTA TTACCCACCA AGCACAAGTA
GCAGCGCAAG CACATCAGCA TATTTTGGTA CAAAAACACC ATGACGAGCA AACTGAAAGT
GAGCTTGTCA TCTTAACTGA GAGCGATCAA GTTGATGAGC TGGCACGTAT GTCTGGTGGT
GTGATCATAA CCGACGTCAC CCGTGACCAT GCTCGCAGTT TATTGAGCGA TGTTAAATGA
 
Protein sequence
MLVSLTLHQF ALIAQHELSV AEGFNVITGE TGAGKSLLLD ALSLCVGERA DMAMVRHGAA 
HADIYAQFDV ENNPVIAEWF AKNERALEEP EVLIRRQLNN TGRSKAWLNG TPVSLAELKS
LGSLLVNIHS QHAQQALLKP QFVVQWLDEM AQITSLTTKT TSSYQQYQQL KRRADDLASR
EAQRQDRIQL LQSQLADIAP LLVVDYAEVE AEHEELSNIE ALMIEASHGL HLLDNDTDEP
DVMTLLGQAI KLCDNQMSVS QTFEQASEQL HLAQQQITEV TSLLSDYAEQ QLPDPERLQS
LDSLISLGHR LSRKHNLPAN DLINEAKGWE AQLEQLENEP SSDAMAVQIE QAWQEYIALA
TELNKERSKA APIVSKQLIK QLQPLALPNA RCEFVFTKKT DVSQYNGQGC YDIDLLFSAN
VGMPMQPLHK IASGGELSRM ALVMQVLQAT NADNNAAKPM LVFDEVDVGI SGGTAQVVGE
LLRALGQTQQ LLAITHQAQV AAQAHQHILV QKHHDEQTES ELVILTESDQ VDELARMSGG
VIITDVTRDH ARSLLSDVK