Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0058 |
Symbol | recN |
ID | 3514623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 64062 |
End bp | 65741 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637668740 |
Product | DNA repair protein |
Protein accession | YP_263366 |
Protein GI | 71064639 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTAGTAT CATTAACTTT ACATCAGTTT GCATTAATCG CCCAGCATGA GCTGAGTGTG GCTGAAGGCT TCAATGTCAT CACTGGTGAG ACGGGTGCTG GCAAATCGCT ATTACTCGAT GCGCTGTCTT TATGTGTCGG CGAGCGCGCA GACATGGCGA TGGTCAGACA TGGCGCGGCG CACGCGGATA TATACGCGCA ATTTGATGTA GAAAACAACC CCGTCATTGC TGAATGGTTT GCCAAAAATG AGCGCGCGCT AGAAGAGCCA GAAGTATTGA TTCGTCGGCA ACTCAATAAT ACAGGACGCT CAAAAGCTTG GTTAAATGGA ACACCTGTCA GTTTGGCTGA ACTCAAAAGC TTAGGGTCAT TGCTGGTCAA TATTCATAGT CAGCACGCGC AGCAAGCGTT GCTCAAACCG CAGTTTGTGG TGCAATGGTT AGATGAAATG GCACAGATAA CTTCTCTTAC TACGAAAACT ACCAGTAGCT ATCAGCAGTA TCAGCAGCTC AAACGCCGTG CTGACGATCT TGCTAGCCGT GAAGCGCAGC GCCAAGACCG TATTCAACTT CTACAAAGCC AGCTGGCAGA TATCGCACCG TTATTGGTCG TTGACTATGC AGAAGTAGAA GCGGAGCATG AAGAACTATC CAATATTGAA GCGCTGATGA TCGAGGCCAG TCATGGCTTG CATCTGCTCG ATAATGATAC CGATGAACCA GATGTCATGA CCTTGCTCGG GCAAGCGATT AAGCTATGCG ATAATCAGAT GAGCGTTAGC CAAACCTTTG AGCAAGCTTC AGAACAGCTG CATTTGGCGC AGCAGCAAAT TACTGAAGTG ACCAGCTTGT TGTCAGATTA TGCTGAGCAG CAACTGCCTG ACCCTGAGCG CTTGCAGTCA TTAGACAGTT TAATCAGCTT AGGTCATCGC CTGTCACGTA AGCACAACCT GCCAGCCAAC GACTTAATTA ATGAAGCCAA AGGGTGGGAA GCGCAATTAG AACAGTTAGA AAACGAGCCA AGCAGTGATG CAATGGCGGT GCAAATCGAG CAAGCATGGC AAGAATATAT AGCACTAGCA ACTGAGCTAA ATAAAGAACG CTCTAAAGCC GCACCGATTG TCAGCAAACA GCTGATTAAG CAATTACAGC CGCTTGCCCT GCCCAATGCA CGCTGCGAGT TCGTATTTAC CAAAAAGACC GATGTCAGCC AATATAATGG GCAAGGCTGT TATGATATCG ACTTATTATT TAGCGCCAAC GTCGGTATGC CGATGCAACC GCTGCATAAA ATCGCTTCAG GCGGCGAGCT GTCACGTATG GCGCTGGTGA TGCAGGTCTT GCAAGCGACC AATGCTGATA ATAATGCGGC AAAACCTATG CTGGTCTTTG ACGAGGTTGA TGTCGGTATC AGTGGTGGTA CGGCACAAGT TGTCGGTGAG CTATTGCGTG CACTTGGGCA AACTCAGCAA TTACTCGCTA TTACCCACCA AGCACAAGTA GCAGCGCAAG CACATCAGCA TATTTTGGTA CAAAAACACC ATGACGAGCA AACTGAAAGT GAGCTTGTCA TCTTAACTGA GAGCGATCAA GTTGATGAGC TGGCACGTAT GTCTGGTGGT GTGATCATAA CCGACGTCAC CCGTGACCAT GCTCGCAGTT TATTGAGCGA TGTTAAATGA
|
Protein sequence | MLVSLTLHQF ALIAQHELSV AEGFNVITGE TGAGKSLLLD ALSLCVGERA DMAMVRHGAA HADIYAQFDV ENNPVIAEWF AKNERALEEP EVLIRRQLNN TGRSKAWLNG TPVSLAELKS LGSLLVNIHS QHAQQALLKP QFVVQWLDEM AQITSLTTKT TSSYQQYQQL KRRADDLASR EAQRQDRIQL LQSQLADIAP LLVVDYAEVE AEHEELSNIE ALMIEASHGL HLLDNDTDEP DVMTLLGQAI KLCDNQMSVS QTFEQASEQL HLAQQQITEV TSLLSDYAEQ QLPDPERLQS LDSLISLGHR LSRKHNLPAN DLINEAKGWE AQLEQLENEP SSDAMAVQIE QAWQEYIALA TELNKERSKA APIVSKQLIK QLQPLALPNA RCEFVFTKKT DVSQYNGQGC YDIDLLFSAN VGMPMQPLHK IASGGELSRM ALVMQVLQAT NADNNAAKPM LVFDEVDVGI SGGTAQVVGE LLRALGQTQQ LLAITHQAQV AAQAHQHILV QKHHDEQTES ELVILTESDQ VDELARMSGG VIITDVTRDH ARSLLSDVK
|
| |