| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0052 |
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| Symbol | xerD |
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| ID | 3514617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 59255 |
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| End bp | 60193 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637668734 |
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| Product | phage integrase |
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| Protein accession | YP_263360 |
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| Protein GI | 71064633 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCGCG ACCGTGCCGT ACAGCAGCGC CAACCAAAAG CGCTGGCAGT AGATGATGAA
CCGGCTTATA TGACCGAATT TCGTCAAGCG ATGCTGGCTC GTGGTTTGGC AACGCGTACC
CGTAATGCTT ATGTGCGTGA TTTGCGCTCC TGCGAGTTAA CCAATCACGC GGCACTAACG
CGTTGGCAGC CCGAAGATGT GCTGTGCTGC CTGTCTATTC TTACTCAAGA TGGCAAAACG
CCGCGTACGC AAGCACGCAT GCTTTCAAGC CTACGCCAGT TTTATCTGTG GATGATTGCC
AGTAACCTAC GTGAAGACAA CCCTTGTGAG CGTATTAAAA GCCCAAAACT TGGTCGTCCA
CTGCCAAAAG ATTTGGCGGA AGCTGACGTC GATAATCTCC TTGCCGCGCC CGATAGCAGT
ACTGCGCTAG GGCTACGTGA TAAAGCCATG TTAGAGGTAC TCTATGCTTG CGGTTTGCGC
GTCAGTGAAT TGGTGAATTT ATCATTAGAA CAAGTGAATC TAAACTCTGG CTGGCTACAA
ATCACAGGGA AAGGAAATAA GACCCGTTTA GTGCCATTAG GAGAATATGC ATCAGATGCG
TTAGAAGATT ATTTGACGCA TGGACGTGGT GATTTGATAG CCCATTTAAA AGCAGGAAAT
TGCCAAGCGG TGTTTTTGAC AGCGCAAGGC GGCTATATGA CACGGCAAAA TTTTTGGTAT
CTGTTAAAGA AGTACGCCAA AGTTGCCAGT ATTGATAAAG CGTTATCACC GCATACGCTA
CGTCACGCAT TTGCCACCCA TCTACTCAAT CATGGTGCAG ATTTACGTAG CGTGCAGTTG
TTGCTGGGTC ATAGTAATTT ATCAACGACG CAGATATATA CTCATGTGGC GACGGCAAGA
TTGCAAAAAC TCCATGCGGA GCATCATCCA CGGGGGTAG
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| Protein sequence | MSRDRAVQQR QPKALAVDDE PAYMTEFRQA MLARGLATRT RNAYVRDLRS CELTNHAALT
RWQPEDVLCC LSILTQDGKT PRTQARMLSS LRQFYLWMIA SNLREDNPCE RIKSPKLGRP
LPKDLAEADV DNLLAAPDSS TALGLRDKAM LEVLYACGLR VSELVNLSLE QVNLNSGWLQ
ITGKGNKTRL VPLGEYASDA LEDYLTHGRG DLIAHLKAGN CQAVFLTAQG GYMTRQNFWY
LLKKYAKVAS IDKALSPHTL RHAFATHLLN HGADLRSVQL LLGHSNLSTT QIYTHVATAR
LQKLHAEHHP RG
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