Gene Psyc_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0047 
Symbol 
ID3514612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp53920 
End bp54528 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content42% 
IMG OID637668729 
Producthypothetical protein 
Protein accessionYP_263355 
Protein GI71064628 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.23937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATA GACCACCTAG CGATCTATTA GAAAAAGCCA AATACTGGCG CGAAGACATC 
AATTTTCGTC AAGATGTGCT GGGCAAGCCG TTTGATTTTG CGACCACGTG GGGTATTTTT
TCACCACAAA AACTTGATGA TGGTAGCTTG ATGTTGCTCG ATTATGTGGA TTTTCAAAAT
GATGATGACT CGATAGATTT GGGCTGTGGC TATGGCGTAT TGGGTATGGC CGCAGCGCGT
GAATGCCCTA ATGGTCAGCA TACTTTAATT GATAAAGACT TTATGGCGGT TGAATATGCG
CGCCTTAATT GTGAAAAGAA TGGTCTGAAT AATGTCGATG TGCATTTATC AAACGGTTTT
AATCATGTGG ATAAAGCGAA AGACTTTAGC CTTGTGATGT CGAACCTGCC AGCCAAGGTA
GGCAAAGAGC AGCATTACCT ATATTTTCTT GATGCTCATG CGCGTATGCG TAAAGGTGGA
CGCTTTTACG TGGTGACGAT TAATGGTTTA CGTCAATTCA TGAAGCGCTC ATTTATCGAA
GTATTTGGTA ATAGCGAAAA GGTCAAACAA GGTAAAACCT ATACGATTAC CATGGCAACC
AAAGATTAA
 
Protein sequence
MSHRPPSDLL EKAKYWREDI NFRQDVLGKP FDFATTWGIF SPQKLDDGSL MLLDYVDFQN 
DDDSIDLGCG YGVLGMAAAR ECPNGQHTLI DKDFMAVEYA RLNCEKNGLN NVDVHLSNGF
NHVDKAKDFS LVMSNLPAKV GKEQHYLYFL DAHARMRKGG RFYVVTINGL RQFMKRSFIE
VFGNSEKVKQ GKTYTITMAT KD