Gene Psyc_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0042 
SymbolholC 
ID3514778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp47861 
End bp48319 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content41% 
IMG OID637668724 
ProductDNA polymerase III, chi subunit 
Protein accessionYP_263350 
Protein GI71064623 
COG category[L] Replication, recombination and repair 
COG ID[COG2927] DNA polymerase III, chi subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.331022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA GTTTTTATGT TTTAAGTGAG AGTAAAGCTC AAGATTTCTT GGGCTTTATT 
TGTCAGCTGA CCCAAACCGC GCTTAATAAA AGCACGCAAT CACTGCTGAT TCTTATTGAA
GATGATGCCG CATTGCTGTC GGCGCTTAAT GAGGCGTTAT GGACGCAAGA GGCTACTAGC
TTTATACCCC ATCAATACCT TTTGGACGCT GATACCGATA TTAATCATAA AACATTAGCA
CCCATCCTTC TTAGCAGTTA TATGCCTGCT AACTTTAAAG GTATGGTTCT TAATACCACC
ATATATCCAG TGAACACCTT TATGGCAGCA ACCAACAATG CGCAGCCTAC TCGAGTACTT
GAACTGATAA AACCTGATGC GACTAGTGTG CAAGAAGGTC GTCACAAATA TAAAAGCTAC
CAACAACTAG GCTATGAGCT GACCCATTTC AACGTTTAA
 
Protein sequence
MKISFYVLSE SKAQDFLGFI CQLTQTALNK STQSLLILIE DDAALLSALN EALWTQEATS 
FIPHQYLLDA DTDINHKTLA PILLSSYMPA NFKGMVLNTT IYPVNTFMAA TNNAQPTRVL
ELIKPDATSV QEGRHKYKSY QQLGYELTHF NV