Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0041 |
Symbol | sstT |
ID | 3514777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 46320 |
End bp | 47522 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637668723 |
Product | serine/threonine transporter SstT |
Protein accession | YP_263349 |
Protein GI | 71064622 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3633] Na+/serine symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0606583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCAT TGATTGCAAT GTACCAGCGT ATAGGACTAG TACCGCTTAT TATTATCGGT TTGGTATTAG GAGTATTGAT AGGTTGGTTG GCACCAAATA TTGGTATTGC ATTAGGATTA TTGGGTACCT TATTTGTGGG GGCACTAAAA GCCGTCGCAC CGATACTGGT ATTTGTTTTG GTCATGGCAG CCATTAGCCA ACATCGCAGC GGTAATGAAG TCTATGTCAA ACCAGTGCTT ATCATGTATA TGTTTGGCAC TTTCTTGGCA GCGTTGACAG CCGTAGGGGC AAGCTTCTTA TTTCCAACAG AGTTGGTCTT GGTCAATGCC GTTATTGAGC CAGTACCACC AGCAAATTTA AAAGAAGTTT TGACCAACTT GCTGATGAAT CTAGTTGCTA ATCCTGTCAA TGCCATCGCT GAAGCCAACT ACATTGGTAT TTTAGCATGG GCCATCATCA TTGGTTTTTC CTTACGTCAA GCGAGCGACA CTGCTCGTAC CGTGGTTGGC GATTTTTCTG ATGCCATCTC ACAAGTGGTC AAATGGGTCA TCGCCCTAGC CCCTTTTGGT ATCTTGGGTT TGGTCGCAAA TACGGTCGCT GAGACAGGCT TCGCCGCTTT GGCAGGTTAT GCTCGTATCT TAATGGTATT GGTCGGTTGT ATGCTGTTTA TCGCTCTAGT CGTCAACCCA CTTATCATTT TAGTTAAGAC AGGAAAGAAC CCTTATCCAC TCGTATTCAT ATGCTTACGT GAGTCTGGTA TCACCGCATT TTTTACCCGC AGTTCAGCGG CAAATATCCC CATCAATATG AACCTTGCGC GCAAACTAGG TCTGCATGAG GACACATATT CGGTGACTAT TCCGCTAGGC GCAACCATCA ATATGGCGGG CGCAGCAATC ACCATTAACG TCTTAACGCT TGCTGCTGCC CATACGCTTG GTATTGAAGT GACATTTGCA TCAGCGCTGC TGCTAAGTTT GGTTGCAACG ATTAGTGCGT GCGGCGCATC CGGTGTCGCT GGTGGCTCAT TGCTGCTGAT TCCACTGGCA GCCAGTTTAT TTAGTATCCC AAATGACATT GCCATGCAAG TGGTCGCCAT TGGTTTTATT ATCGGTGTGA TACAAGACTC AGCAGAAACT GCTCTGAACT CATCAACAGA CGTCTTATTT ACCGCTGCTG CTGATCCAAA ATATGCCCGT TAA
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Protein sequence | MRSLIAMYQR IGLVPLIIIG LVLGVLIGWL APNIGIALGL LGTLFVGALK AVAPILVFVL VMAAISQHRS GNEVYVKPVL IMYMFGTFLA ALTAVGASFL FPTELVLVNA VIEPVPPANL KEVLTNLLMN LVANPVNAIA EANYIGILAW AIIIGFSLRQ ASDTARTVVG DFSDAISQVV KWVIALAPFG ILGLVANTVA ETGFAALAGY ARILMVLVGC MLFIALVVNP LIILVKTGKN PYPLVFICLR ESGITAFFTR SSAANIPINM NLARKLGLHE DTYSVTIPLG ATINMAGAAI TINVLTLAAA HTLGIEVTFA SALLLSLVAT ISACGASGVA GGSLLLIPLA ASLFSIPNDI AMQVVAIGFI IGVIQDSAET ALNSSTDVLF TAAADPKYAR
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