Gene Psyc_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0041 
SymbolsstT 
ID3514777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp46320 
End bp47522 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content46% 
IMG OID637668723 
Productserine/threonine transporter SstT 
Protein accessionYP_263349 
Protein GI71064622 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3633] Na+/serine symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0606583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCAT TGATTGCAAT GTACCAGCGT ATAGGACTAG TACCGCTTAT TATTATCGGT 
TTGGTATTAG GAGTATTGAT AGGTTGGTTG GCACCAAATA TTGGTATTGC ATTAGGATTA
TTGGGTACCT TATTTGTGGG GGCACTAAAA GCCGTCGCAC CGATACTGGT ATTTGTTTTG
GTCATGGCAG CCATTAGCCA ACATCGCAGC GGTAATGAAG TCTATGTCAA ACCAGTGCTT
ATCATGTATA TGTTTGGCAC TTTCTTGGCA GCGTTGACAG CCGTAGGGGC AAGCTTCTTA
TTTCCAACAG AGTTGGTCTT GGTCAATGCC GTTATTGAGC CAGTACCACC AGCAAATTTA
AAAGAAGTTT TGACCAACTT GCTGATGAAT CTAGTTGCTA ATCCTGTCAA TGCCATCGCT
GAAGCCAACT ACATTGGTAT TTTAGCATGG GCCATCATCA TTGGTTTTTC CTTACGTCAA
GCGAGCGACA CTGCTCGTAC CGTGGTTGGC GATTTTTCTG ATGCCATCTC ACAAGTGGTC
AAATGGGTCA TCGCCCTAGC CCCTTTTGGT ATCTTGGGTT TGGTCGCAAA TACGGTCGCT
GAGACAGGCT TCGCCGCTTT GGCAGGTTAT GCTCGTATCT TAATGGTATT GGTCGGTTGT
ATGCTGTTTA TCGCTCTAGT CGTCAACCCA CTTATCATTT TAGTTAAGAC AGGAAAGAAC
CCTTATCCAC TCGTATTCAT ATGCTTACGT GAGTCTGGTA TCACCGCATT TTTTACCCGC
AGTTCAGCGG CAAATATCCC CATCAATATG AACCTTGCGC GCAAACTAGG TCTGCATGAG
GACACATATT CGGTGACTAT TCCGCTAGGC GCAACCATCA ATATGGCGGG CGCAGCAATC
ACCATTAACG TCTTAACGCT TGCTGCTGCC CATACGCTTG GTATTGAAGT GACATTTGCA
TCAGCGCTGC TGCTAAGTTT GGTTGCAACG ATTAGTGCGT GCGGCGCATC CGGTGTCGCT
GGTGGCTCAT TGCTGCTGAT TCCACTGGCA GCCAGTTTAT TTAGTATCCC AAATGACATT
GCCATGCAAG TGGTCGCCAT TGGTTTTATT ATCGGTGTGA TACAAGACTC AGCAGAAACT
GCTCTGAACT CATCAACAGA CGTCTTATTT ACCGCTGCTG CTGATCCAAA ATATGCCCGT
TAA
 
Protein sequence
MRSLIAMYQR IGLVPLIIIG LVLGVLIGWL APNIGIALGL LGTLFVGALK AVAPILVFVL 
VMAAISQHRS GNEVYVKPVL IMYMFGTFLA ALTAVGASFL FPTELVLVNA VIEPVPPANL
KEVLTNLLMN LVANPVNAIA EANYIGILAW AIIIGFSLRQ ASDTARTVVG DFSDAISQVV
KWVIALAPFG ILGLVANTVA ETGFAALAGY ARILMVLVGC MLFIALVVNP LIILVKTGKN
PYPLVFICLR ESGITAFFTR SSAANIPINM NLARKLGLHE DTYSVTIPLG ATINMAGAAI
TINVLTLAAA HTLGIEVTFA SALLLSLVAT ISACGASGVA GGSLLLIPLA ASLFSIPNDI
AMQVVAIGFI IGVIQDSAET ALNSSTDVLF TAAADPKYAR