Gene Psyc_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0037 
Symbol 
ID3514773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp41787 
End bp43805 
Gene Length2019 bp 
Protein Length672 aa 
Translation table11 
GC content47% 
IMG OID637668719 
ProductABC transporter ATPase 
Protein accessionYP_263345 
Protein GI71064618 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.489009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAT TTAAAGACGT TGGTGTTCGC CGTGATGGTC GTGAGTTGTT TGCAGGGGCA 
AGCTTCCAGC TACATCCGGG CCACAAAGTT GGCTTAACGG GCAATAACGG GACCGGAAAA
TCGACCTTAT TTGCCTTATT ATTGACACGA ATGGGTACCG GTGACACCGA AGTGACGCTT
GATAAAGGTG AAGTGAGTAT CCCTGATAGT TGGCATGTGG CGCATATGGC GCAGGAAGTT
GGCGCGACCA CACAGACGGC GATTGATTAT GTGCTGAGCG GTGATGAGCA ATGGTACGAG
ATTAACGCCA CTTTGAATGA CCTAAGCAGC GTCAGCGATG AGCAGATTGG GGTATTGCAT
CAGCAGTTTG ATGAAATTGA TGGTTATCGT ACACCGACCA AAGCCGCACA AATCATGGCG
GGTTTAGGTT TTAATACCAA CCAACATGAG CTGCCAGTAG AAGGGTTTTC GGGTGGCTGG
CGCATGCGCT TAAACCTTGC TAAAACCTTG ATGAGCCGTG CAGATTTGAT GCTACTTGAT
GAGCCAACCA ACCATTTGGA TTTGGATGCT ATCTTGTGGC TTGAGACGTG GATTAATGCT
TTTACCGGTC TAGTTATCGT TATCTCGCAT GACCAAACGT TCTTGGACAA TACGGTTGGT
CATATCTTGC ACGTTGAGCA GCAAAAAATC ACTCTGTATA CCGGTAACTA TCAGCAGTTT
ATTCGCACGC GTCACGAGCG TATGGCACAG CAGCAGCAAG CTTTTGAGAA GCAAGAAGCG
ACCAAAGCAC ATTTGGATGA CTTTATTCGG CGTTTCCGCG CAAAGGCCAG TAAGGCAAAG
CAAGCGCAGA GCCGTATCAA GCAGCTTGAG CGTATGGCTG AGCTGTCACC GATGATGGCA
GACAATCCGT TTTCGTTCCG CTTTTATGAG CCAGCTAACA TGAGCTCGCC GTTGATTGAG
TTGACCGATG CAGATATTGG CTATAGCGAC ACACCGCTAC TTTATAATGC CAATGTGCAA
GTCACCCCTG ATACTCGTAT CGGGCTGCTA GGGATGAATG GCGCAGGTAA ATCGACCTTG
ATTAAAGCAT TGGTCGGTGA GCTTGGTGTA TTAACAGGCA GCTATAATGT CTCAGATACG
CTAAAGCTAG GCTATTTCAA CCAGCATCAA ATGGATATCC TTGATCCTAA GGCAACCCCG
ATAGAGATGT TACGCCGCTT AGCAGGCAAA ACTTCTGATG CGATGCTACG TTCGTTTTTA
GGTAGCTTTG ATTTCCGTGG CGACCGTATC GATACCATCA GTGAGCTATT CTCTGGTGGC
GAGCGTGCGC GCTTAACGTT AGCTTTGATT GTTTGGCAAC GTCCGAATGT GCTGGTACTC
GATGAGCCAA CCAACCATTT AGACTTACAA ATGCGTCAAG CGTTGACGAT TGCTTTGCAA
GGCTTTGAAG GGGCAGTGGT ACTGGTATCG CATGACCGTG AGCTGATTGC CAACGTCTGT
GATGAGCTAT TTTTGGTACA TGATGGCCAA ATCGATGAGT TCGATGGTGA TATCAGCGAC
TACGGTAAAT GGCTTGCCGA AAAGCGTAAA CAAGAAAACT CGCAAGATAA AAATACCAGT
AAGAAAAAAA GTAAAAAAGA GAGTAAGAAG TTTGTTTCAC GTGAAACAAA TGCCAATTCA
GCAGGCAGCC AAGCAGGCAA GCAAGTGGGC AACAGCGAGT CTCAACCTGC GCTTAGTAAA
GATGCGCAGC GCAAGCTGGC GGCTGAACAA CGCAAATTAA CCGCGCCTAT CCGCCGTGAT
ATCGAAACTA CAGAAAAGAC CTTAGCGACC ATTGATGAAA AGCTGCTGGT TTTAGAAGAA
AAACTGGCGA ATACTGATCT TTATGAAGAA AGCCGTAAGG CTGATTTGAT GACATTGTTG
AACGAGCAAA CCATGCTACA GCAGCAACAT AGTCAACATG AAGAAAAGTT GCTACTGGCA
ATGACAACCT TGGAAGAAAT GGAAGCCAGT ATCGGCTAA
 
Protein sequence
MIEFKDVGVR RDGRELFAGA SFQLHPGHKV GLTGNNGTGK STLFALLLTR MGTGDTEVTL 
DKGEVSIPDS WHVAHMAQEV GATTQTAIDY VLSGDEQWYE INATLNDLSS VSDEQIGVLH
QQFDEIDGYR TPTKAAQIMA GLGFNTNQHE LPVEGFSGGW RMRLNLAKTL MSRADLMLLD
EPTNHLDLDA ILWLETWINA FTGLVIVISH DQTFLDNTVG HILHVEQQKI TLYTGNYQQF
IRTRHERMAQ QQQAFEKQEA TKAHLDDFIR RFRAKASKAK QAQSRIKQLE RMAELSPMMA
DNPFSFRFYE PANMSSPLIE LTDADIGYSD TPLLYNANVQ VTPDTRIGLL GMNGAGKSTL
IKALVGELGV LTGSYNVSDT LKLGYFNQHQ MDILDPKATP IEMLRRLAGK TSDAMLRSFL
GSFDFRGDRI DTISELFSGG ERARLTLALI VWQRPNVLVL DEPTNHLDLQ MRQALTIALQ
GFEGAVVLVS HDRELIANVC DELFLVHDGQ IDEFDGDISD YGKWLAEKRK QENSQDKNTS
KKKSKKESKK FVSRETNANS AGSQAGKQVG NSESQPALSK DAQRKLAAEQ RKLTAPIRRD
IETTEKTLAT IDEKLLVLEE KLANTDLYEE SRKADLMTLL NEQTMLQQQH SQHEEKLLLA
MTTLEEMEAS IG