Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0032 |
Symbol | mpl |
ID | 3514768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 35713 |
End bp | 37230 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637668714 |
Product | putative UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase |
Protein accession | YP_263340 |
Protein GI | 71064613 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.600705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATTC ATATTCTTGG TATTTGTGGT ACTTTTATGG GCTCGCTGGC ATTGCTGGCA CGCGCGCTTG GACATACGGT GACTGGTTCA GATGCCAATA TTTATCCGCC CATGTCCACC CAGCTTGAAC AGGCAGGCGT CACTATCGAA GAGGGCTATT TGATAGCGCA TTTGCAGCCA GCGCCGGATT TGGTAGTCGT CGGTAATGCG ATGAAACGCG GCATGGATGT GATTGAATAT ATGCTCGATA CAGGTCTGCG CTATACCTCT GGACCGCAGT TTTTATCTGA GCAAGTATTG CAATCTCGCC ATGTCATTGC GGTGGCAGGT ACTCATGGCA AGACCACGAC GACGACCATG CTCGCGTGGA TACTGCATTA TGCCGGTATC GATGCAGGGT TTTTGATTGG CGGTGTGCCA TTAGTCAATA CTACTGATAC GAATTTGCAG CAAGTTTTTG CTCATAGCAG TTATTTGGGC ACAGAAAAAG ACGATAGTGA TAACTCAGTA AACACAGGCT ATTTTGTCAT TGAAGCAGAT GAATATGATT CTGCATTTTT TGATAAGCGC TCAAAATTCG TGCATTATCG TCCACGTACG GCAATTTTAA ACAACTTAGA ATTTGATCAT GCCGATATTT TTGCTGATCT AGATGCTATT CAAACCCAAT TTCACCATAT GGTACGTATG ATTCCGAGCA CCGGTAAAAT CATTATGCCA GCGGCGACCA TTAGCCTAGA AGATACTTTG GCAAAAGGGG TTTGGACGCC TATCTGGCGT ACATCTGTTA TTGACTCAAC AATTTCTAGT GTTCGTAGAG AAGATAGCCC CTTAGAAAAC AGCCAAGCAG AAAATAGTAG CGACTGGCAA GCTGAACTTA TTAGTGCAGA TGGTAGTCAA TTTACTGTGA GTTTCAATGA TAATAAAGAA GCAACGGCAT TGGTCAATTG GTCAATGAGT GGTCTGCATA ACGTCAATAA TGCCCTCGTT GCCATAGCGG CAGCTTATAA TATTGGGGTG AGTGTCAAAA CTGCTTGCGC CGCTTTATCA GCATTTGCCG GTATCAAGCG CCGGATGGAG CTTATCGGCG ATGTAAATGA CATCTTAGTT TTTGATGATT TTGCTCATCA CCCAACGGCG ATTACTACCA CTTTGGATGG TGCTAAGAAA AAGCTAGCGG ATAGACGACT TTGGGCAATT ATTGAGCCGC GTAGCAATAC TATGAAAATG GGTATCCATC AAGATAGTCT AGCGCAGTCC GCTACCCTCG CTGACCATAC ATTATGGTAC GAGCCTACCG GACTTGAATG GGGTCTAAAA GAAGTCATTG ATAATGCCAC TATCGCAAAC CCAAGTATTG GCAGCCAACA GGTACTCTCT AGCGTGGATG ACATTATTAA GCATATCTGT ACACATGCCA AGGCAGGTGA TGCGATAGTG ATTATGTCTA ATGGTGGCTT CGAAGGCATT CATCAGCGTT TATTAACTGC TTTAGGTAAT ATAGTTGCAA TACTTTAA
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Protein sequence | MHIHILGICG TFMGSLALLA RALGHTVTGS DANIYPPMST QLEQAGVTIE EGYLIAHLQP APDLVVVGNA MKRGMDVIEY MLDTGLRYTS GPQFLSEQVL QSRHVIAVAG THGKTTTTTM LAWILHYAGI DAGFLIGGVP LVNTTDTNLQ QVFAHSSYLG TEKDDSDNSV NTGYFVIEAD EYDSAFFDKR SKFVHYRPRT AILNNLEFDH ADIFADLDAI QTQFHHMVRM IPSTGKIIMP AATISLEDTL AKGVWTPIWR TSVIDSTISS VRREDSPLEN SQAENSSDWQ AELISADGSQ FTVSFNDNKE ATALVNWSMS GLHNVNNALV AIAAAYNIGV SVKTACAALS AFAGIKRRME LIGDVNDILV FDDFAHHPTA ITTTLDGAKK KLADRRLWAI IEPRSNTMKM GIHQDSLAQS ATLADHTLWY EPTGLEWGLK EVIDNATIAN PSIGSQQVLS SVDDIIKHIC THAKAGDAIV IMSNGGFEGI HQRLLTALGN IVAIL
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