Gene Psyc_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0032 
Symbolmpl 
ID3514768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp35713 
End bp37230 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content44% 
IMG OID637668714 
Productputative UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase 
Protein accessionYP_263340 
Protein GI71064613 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.600705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATTC ATATTCTTGG TATTTGTGGT ACTTTTATGG GCTCGCTGGC ATTGCTGGCA 
CGCGCGCTTG GACATACGGT GACTGGTTCA GATGCCAATA TTTATCCGCC CATGTCCACC
CAGCTTGAAC AGGCAGGCGT CACTATCGAA GAGGGCTATT TGATAGCGCA TTTGCAGCCA
GCGCCGGATT TGGTAGTCGT CGGTAATGCG ATGAAACGCG GCATGGATGT GATTGAATAT
ATGCTCGATA CAGGTCTGCG CTATACCTCT GGACCGCAGT TTTTATCTGA GCAAGTATTG
CAATCTCGCC ATGTCATTGC GGTGGCAGGT ACTCATGGCA AGACCACGAC GACGACCATG
CTCGCGTGGA TACTGCATTA TGCCGGTATC GATGCAGGGT TTTTGATTGG CGGTGTGCCA
TTAGTCAATA CTACTGATAC GAATTTGCAG CAAGTTTTTG CTCATAGCAG TTATTTGGGC
ACAGAAAAAG ACGATAGTGA TAACTCAGTA AACACAGGCT ATTTTGTCAT TGAAGCAGAT
GAATATGATT CTGCATTTTT TGATAAGCGC TCAAAATTCG TGCATTATCG TCCACGTACG
GCAATTTTAA ACAACTTAGA ATTTGATCAT GCCGATATTT TTGCTGATCT AGATGCTATT
CAAACCCAAT TTCACCATAT GGTACGTATG ATTCCGAGCA CCGGTAAAAT CATTATGCCA
GCGGCGACCA TTAGCCTAGA AGATACTTTG GCAAAAGGGG TTTGGACGCC TATCTGGCGT
ACATCTGTTA TTGACTCAAC AATTTCTAGT GTTCGTAGAG AAGATAGCCC CTTAGAAAAC
AGCCAAGCAG AAAATAGTAG CGACTGGCAA GCTGAACTTA TTAGTGCAGA TGGTAGTCAA
TTTACTGTGA GTTTCAATGA TAATAAAGAA GCAACGGCAT TGGTCAATTG GTCAATGAGT
GGTCTGCATA ACGTCAATAA TGCCCTCGTT GCCATAGCGG CAGCTTATAA TATTGGGGTG
AGTGTCAAAA CTGCTTGCGC CGCTTTATCA GCATTTGCCG GTATCAAGCG CCGGATGGAG
CTTATCGGCG ATGTAAATGA CATCTTAGTT TTTGATGATT TTGCTCATCA CCCAACGGCG
ATTACTACCA CTTTGGATGG TGCTAAGAAA AAGCTAGCGG ATAGACGACT TTGGGCAATT
ATTGAGCCGC GTAGCAATAC TATGAAAATG GGTATCCATC AAGATAGTCT AGCGCAGTCC
GCTACCCTCG CTGACCATAC ATTATGGTAC GAGCCTACCG GACTTGAATG GGGTCTAAAA
GAAGTCATTG ATAATGCCAC TATCGCAAAC CCAAGTATTG GCAGCCAACA GGTACTCTCT
AGCGTGGATG ACATTATTAA GCATATCTGT ACACATGCCA AGGCAGGTGA TGCGATAGTG
ATTATGTCTA ATGGTGGCTT CGAAGGCATT CATCAGCGTT TATTAACTGC TTTAGGTAAT
ATAGTTGCAA TACTTTAA
 
Protein sequence
MHIHILGICG TFMGSLALLA RALGHTVTGS DANIYPPMST QLEQAGVTIE EGYLIAHLQP 
APDLVVVGNA MKRGMDVIEY MLDTGLRYTS GPQFLSEQVL QSRHVIAVAG THGKTTTTTM
LAWILHYAGI DAGFLIGGVP LVNTTDTNLQ QVFAHSSYLG TEKDDSDNSV NTGYFVIEAD
EYDSAFFDKR SKFVHYRPRT AILNNLEFDH ADIFADLDAI QTQFHHMVRM IPSTGKIIMP
AATISLEDTL AKGVWTPIWR TSVIDSTISS VRREDSPLEN SQAENSSDWQ AELISADGSQ
FTVSFNDNKE ATALVNWSMS GLHNVNNALV AIAAAYNIGV SVKTACAALS AFAGIKRRME
LIGDVNDILV FDDFAHHPTA ITTTLDGAKK KLADRRLWAI IEPRSNTMKM GIHQDSLAQS
ATLADHTLWY EPTGLEWGLK EVIDNATIAN PSIGSQQVLS SVDDIIKHIC THAKAGDAIV
IMSNGGFEGI HQRLLTALGN IVAIL