Gene Psyc_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0030 
Symboldef 
ID3514766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp34198 
End bp34752 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content43% 
IMG OID637668712 
Productpeptide deformylase 
Protein accessionYP_263338 
Protein GI71064611 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTAC TCCCTATTTT AAGCTATCCC GACCCGCGAC TGCGCATGAT TGCAACGCCT 
GTCAAGGAAG TCACTGCTGA AATCAAAACC TTAATCACCG ATATGATTGA GACCATGTAC
GATGCAGAAG GTATCGGTCT GGCTGCAAGC CAAGTTGATC ATCATATTCA GCTTATTGTG
ATGGATTTAT CAGAAGATAA AGACAGCCCA AGAGTGTTTA TCAATCCAAA AGTAACGCCA
TTGGTGGAAG AAAAGCAGCC GTATGAAGAA GGCTGTCTGT CGGTACCAGA TGTCTATGAT
AAGGTTGAGC GCCCAAATAA AGTGCGAATT GAAGCAATAG ATCAAAATGG CAATGCTATC
GATGAAGAAG TTGAAGGCTT ACTGGCAGTA TGTATTCAAC ACGAAATAGA TCATCTAAAT
GGGGTGATTT TTGTTGATTA TTTATCGCGT TTGAAACAGA CGCGTGCGCG TGATAAGGTG
CGTAAAGTCC TTAAAATACG TGAAAAACAA GGCGAGCAAG TTGCGGAAAA AGAGCCGCAG
CCAGCAAATT CTTAA
 
Protein sequence
MALLPILSYP DPRLRMIATP VKEVTAEIKT LITDMIETMY DAEGIGLAAS QVDHHIQLIV 
MDLSEDKDSP RVFINPKVTP LVEEKQPYEE GCLSVPDVYD KVERPNKVRI EAIDQNGNAI
DEEVEGLLAV CIQHEIDHLN GVIFVDYLSR LKQTRARDKV RKVLKIREKQ GEQVAEKEPQ
PANS