Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0029 |
Symbol | |
ID | 3514765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 32915 |
End bp | 34090 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637668711 |
Product | ornithine decarboxylase |
Protein accession | YP_263337 |
Protein GI | 71064610 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAA TCGACCAATA TTTTGACCCT GCCGGCTGGC AGAAATTTAC CAAAGCGGCT GAAGGTCGTG AAACGCCATT TTTGGTGGTT GATCTTAATC GTATTAAAAT AAAATATCAT GAAATGGTTG GTTTTTTTCC TAATGCTAAA ATTCATTATG CGATGAAAGC AAGCCCTGCT GTCGAAGTCA TCAATCTGCT TGCTGAGCTT GGTTCAAACT TTGACTGTGC GTCGATTTAT GAGCTTGATC GCGTGCTTGA CTGCGGCGTT GAGGCCTCAC GTATCTCTTA TGGCAATACC ATCAAAAAGC CTGAGCATGT CAAATATGCC TTTGATAAAG GGATTGATTT GTATGCGACT GATTCAGAAG CAGATTTAAA AAACATCGCA AAACATGCGC CTGGATCAAA AATATTCGTG CGTATCTTGG TACAAGGATC AGAGACCGCT GAGTGGCCGT TGTCACGCAA GTTTGGTTGC CACCCCAATA TGGCGATTGA GCTCTTGATT CAAGCGCAAG AATTGGGCTT GGTACCTTAT GGCATCTCAT TCCATGTGGG CAGTCAGCAA AAAGACGTTG CTGCTTGGGA TGACGCTTTA GCTAAGGTCA AGTATATGTT TGACTGGATG AAGAACGAGG AAGGCATTAA GCTTCAAATG ATTAATTTGG GTGGCGGCTT TCCGGCAAAC TACCTGAGCG AAGTCAATCC TATTAAAGTC TATGCTGAAG AGATTAAAAG CTACTTAAGC GATGACTATA GTGCTGAAGA CATGCCTGAG ATTATTTTAG AGCCTGGTCG CTCGTTGGTT GGCGGTTCAG GGGTACTGGT CAGTGACGTG GTATTAATTT CTCGTAAATC GCATACTGAT TTGACGCGCT GGGTCTATAC CGATGTGGGT TTATTTCAAG GTTTAATCGA AACCTTGGGT GAAGCCATCA AGTACCCTGT TTATACACCA AAAATGGAAA CCTCGACCAG TGCAGGTACG GTCGTATTGG CAGGACCAAC TTGTGATTCA ACTGATATCA TGTATGAAGA AGCGGGTTAT CAGCTACCAG AAGAGCTTGA GATTGGTGAC AAAATATTTT GGTTAACTAC GGGTGCTTAT ACCAACTCTT ATTCCTCTAT CGAGTTCAAT GGCTTCCCAC CGTTAGAAGT GGTCTATGTT AACTAA
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Protein sequence | MIKIDQYFDP AGWQKFTKAA EGRETPFLVV DLNRIKIKYH EMVGFFPNAK IHYAMKASPA VEVINLLAEL GSNFDCASIY ELDRVLDCGV EASRISYGNT IKKPEHVKYA FDKGIDLYAT DSEADLKNIA KHAPGSKIFV RILVQGSETA EWPLSRKFGC HPNMAIELLI QAQELGLVPY GISFHVGSQQ KDVAAWDDAL AKVKYMFDWM KNEEGIKLQM INLGGGFPAN YLSEVNPIKV YAEEIKSYLS DDYSAEDMPE IILEPGRSLV GGSGVLVSDV VLISRKSHTD LTRWVYTDVG LFQGLIETLG EAIKYPVYTP KMETSTSAGT VVLAGPTCDS TDIMYEEAGY QLPEELEIGD KIFWLTTGAY TNSYSSIEFN GFPPLEVVYV N
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