Gene Psyc_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0029 
Symbol 
ID3514765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp32915 
End bp34090 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content43% 
IMG OID637668711 
Productornithine decarboxylase 
Protein accessionYP_263337 
Protein GI71064610 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAA TCGACCAATA TTTTGACCCT GCCGGCTGGC AGAAATTTAC CAAAGCGGCT 
GAAGGTCGTG AAACGCCATT TTTGGTGGTT GATCTTAATC GTATTAAAAT AAAATATCAT
GAAATGGTTG GTTTTTTTCC TAATGCTAAA ATTCATTATG CGATGAAAGC AAGCCCTGCT
GTCGAAGTCA TCAATCTGCT TGCTGAGCTT GGTTCAAACT TTGACTGTGC GTCGATTTAT
GAGCTTGATC GCGTGCTTGA CTGCGGCGTT GAGGCCTCAC GTATCTCTTA TGGCAATACC
ATCAAAAAGC CTGAGCATGT CAAATATGCC TTTGATAAAG GGATTGATTT GTATGCGACT
GATTCAGAAG CAGATTTAAA AAACATCGCA AAACATGCGC CTGGATCAAA AATATTCGTG
CGTATCTTGG TACAAGGATC AGAGACCGCT GAGTGGCCGT TGTCACGCAA GTTTGGTTGC
CACCCCAATA TGGCGATTGA GCTCTTGATT CAAGCGCAAG AATTGGGCTT GGTACCTTAT
GGCATCTCAT TCCATGTGGG CAGTCAGCAA AAAGACGTTG CTGCTTGGGA TGACGCTTTA
GCTAAGGTCA AGTATATGTT TGACTGGATG AAGAACGAGG AAGGCATTAA GCTTCAAATG
ATTAATTTGG GTGGCGGCTT TCCGGCAAAC TACCTGAGCG AAGTCAATCC TATTAAAGTC
TATGCTGAAG AGATTAAAAG CTACTTAAGC GATGACTATA GTGCTGAAGA CATGCCTGAG
ATTATTTTAG AGCCTGGTCG CTCGTTGGTT GGCGGTTCAG GGGTACTGGT CAGTGACGTG
GTATTAATTT CTCGTAAATC GCATACTGAT TTGACGCGCT GGGTCTATAC CGATGTGGGT
TTATTTCAAG GTTTAATCGA AACCTTGGGT GAAGCCATCA AGTACCCTGT TTATACACCA
AAAATGGAAA CCTCGACCAG TGCAGGTACG GTCGTATTGG CAGGACCAAC TTGTGATTCA
ACTGATATCA TGTATGAAGA AGCGGGTTAT CAGCTACCAG AAGAGCTTGA GATTGGTGAC
AAAATATTTT GGTTAACTAC GGGTGCTTAT ACCAACTCTT ATTCCTCTAT CGAGTTCAAT
GGCTTCCCAC CGTTAGAAGT GGTCTATGTT AACTAA
 
Protein sequence
MIKIDQYFDP AGWQKFTKAA EGRETPFLVV DLNRIKIKYH EMVGFFPNAK IHYAMKASPA 
VEVINLLAEL GSNFDCASIY ELDRVLDCGV EASRISYGNT IKKPEHVKYA FDKGIDLYAT
DSEADLKNIA KHAPGSKIFV RILVQGSETA EWPLSRKFGC HPNMAIELLI QAQELGLVPY
GISFHVGSQQ KDVAAWDDAL AKVKYMFDWM KNEEGIKLQM INLGGGFPAN YLSEVNPIKV
YAEEIKSYLS DDYSAEDMPE IILEPGRSLV GGSGVLVSDV VLISRKSHTD LTRWVYTDVG
LFQGLIETLG EAIKYPVYTP KMETSTSAGT VVLAGPTCDS TDIMYEEAGY QLPEELEIGD
KIFWLTTGAY TNSYSSIEFN GFPPLEVVYV N