Gene Psyc_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0017 
Symbol 
ID3514698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp20981 
End bp21799 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content45% 
IMG OID637668699 
ProductIS30 family transposase 
Protein accessionYP_263325 
Protein GI71064598 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.701349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00772607 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGCCGCG TGCTAAGTGT TAAGCCATCA AGCTATTACG ACTGGCTAAG TCGTGATCTC 
AGCGACCAAC AGATACATCG CAATCAGTGT GAACTACTGG TTAAAGTCGC TCATACTGAG
ACCAAGCAGT GCTATGGCGT AGATCGACTG CATGCCCACC TAAGTGCGCA AGGGCACGAT
ATCAGCCAAT ATATGGTTAG AAGCATCAAA GAAGAACATG GCATCAAATG CCGTCGCCAC
AAACGCTTTA AAGTCACCAC CGACTCCAAT CACAACAAGC TGGTCTATCC AAACGTACTG
GATCAGAAGT TTGATGCCAG TCGCCCTAAC CAAGCGTGGG TCAGTGACAT CACCTATATT
TGGACGCTTG AGGGCTGGTT GTATTTAGCG GGGGTTAAGG ACTTATACAC CAAAGAGCTT
GTTGGATATG CCATCAATAA GCGCATGACT GCTGATTTGG TTTGCCGTGC ACTTAATATG
GCAATTAAGA ATAAAGGGCC AAGCCAAGGG CTGACTGTGC ATTCCGATAG AGGCAGCCAG
TATTGTAGCC ATGCGTACCA TAATATTATC AAGCAGCATC ATTTTAAAGG CTCAATGAGT
GGCAAAGGTA ATTGTTATGA CAACGCACCC ATAGAAAGCT TCTGGGGCAC ATTAAAGAAT
GAGCTGGTAT ATCATCAAGA CTATAAAACA AGGTTTACAG CCATTACCGA TATCATTAGA
TATATCGAGC TGTATTACAA TCAGACTAGG ATTCAAAAGG GCTTGGGCTA TAAATCGCCA
AGACAGGTGT GGTTTGACTT TTATCGTCAT GCTGCGTAA
 
Protein sequence
MCRVLSVKPS SYYDWLSRDL SDQQIHRNQC ELLVKVAHTE TKQCYGVDRL HAHLSAQGHD 
ISQYMVRSIK EEHGIKCRRH KRFKVTTDSN HNKLVYPNVL DQKFDASRPN QAWVSDITYI
WTLEGWLYLA GVKDLYTKEL VGYAINKRMT ADLVCRALNM AIKNKGPSQG LTVHSDRGSQ
YCSHAYHNII KQHHFKGSMS GKGNCYDNAP IESFWGTLKN ELVYHQDYKT RFTAITDIIR
YIELYYNQTR IQKGLGYKSP RQVWFDFYRH AA