| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0012 |
|---|
| Symbol | |
|---|
| ID | 3514693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 16221 |
|---|
| End bp | 17198 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637668694 |
|---|
| Product | nuclear receptor binding factor related protein |
|---|
| Protein accession | YP_263320 |
|---|
| Protein GI | 71064593 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000787082 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAGCG CAACTTATGA CCATTTTGGC AAACCAACTG AAGTACTCAG CATCGGTGAT
CGCCCTACTC CAGAACCCAA AGCCAATCAA GTCCGCGTCA AAACCATCTT AGCTTCCATT
CACAATCATG ACTTGCTGAC CATTCGCGGT AAATATGGCT TTAAACCCGA AATGCCTGCC
ATCGGTGGTA GTGAAGCGGT TGGTATCATC GATGCGGTAG GCAGCGACGT CAAAGAATTA
AAAGTGGGTC AACGTGTCGC AGCAGCCAGT GTGCAAGCGA CTTGGGCAGA GTATTTCGTG
GCTGTGGAAG ACATGGTATT CCCGATGCCC GACAGCTTAG ACGATGAGAT GGCAGCACAA
TTGATTGCGA TGCCACTAAG CGCTTTGATG TTGCTTGAGT TCCTAGATTT ACAAGCTGGT
CAATGGGTTA TCCAGAACGC CGCCAATGGC GCAGTCGGTA AGTCACTCGC TATGCTAGCA
GCAGCGCGCG GCGTAAAAAC CATTAACGTG GTACGCAGTA GCGATGCGGT AGCAGAGCTA
GAAGCTATTG GGGTCGAAAA CAATATCAAT ACCGAAGAAG ATGATTGGAA AGACCAAGTA
AAATCCATCC TTGGCGATGA CAAAATCAGC GCAGCAGTTG ACTCTGTTGG TGGCGAAGAC
AGTGGTGCTT TATTATCACT ACTCGGTCAT GGCGGAACAT TTGCAGTGTT TGGCGCGATG
TCAGGTAAGC CGATGATGCT CAATCCTACG GATATGATTT TTAAACAAGC GACCTTAAAA
GGCTTTTGGG GCAGTAAGCT TAGCCAAGAA ATGAGCGTTG AGAATAAGCA ACGCTTGGTT
GATGAGCTGA TTGAGCGCGC GGTAAATGGT CAGTTAAAAC TACCGACTGA AGCGACTTTT
GATTTGTCGG ATATTTTAAA AGCGGTTGAT GGGAAAATGC AGTCAGAAAA GAACGGTAAA
GTGCTGTTAA AACCTTAA
|
|---|
| Protein sequence | MRSATYDHFG KPTEVLSIGD RPTPEPKANQ VRVKTILASI HNHDLLTIRG KYGFKPEMPA
IGGSEAVGII DAVGSDVKEL KVGQRVAAAS VQATWAEYFV AVEDMVFPMP DSLDDEMAAQ
LIAMPLSALM LLEFLDLQAG QWVIQNAANG AVGKSLAMLA AARGVKTINV VRSSDAVAEL
EAIGVENNIN TEEDDWKDQV KSILGDDKIS AAVDSVGGED SGALLSLLGH GGTFAVFGAM
SGKPMMLNPT DMIFKQATLK GFWGSKLSQE MSVENKQRLV DELIERAVNG QLKLPTEATF
DLSDILKAVD GKMQSEKNGK VLLKP
|
|---|
| |