Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0007 |
Symbol | |
ID | 3514688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 9413 |
End bp | 9931 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637668689 |
Product | IS3/IS911 family transposase orfA |
Protein accession | YP_263315 |
Protein GI | 71064588 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2963] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.875163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000690701 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTTACA ATCTAGACTT TAAGATCAAA ATCATCGCAT ACTACAAGCA AGGACATACC GGACTTGCTA CAGGTAAAAA GTTTGCAGTA AACCCCCAAT TTGTACGCAA ATGGGTAAAG CAATACCAAA GCGGTGGTAT AGAAGCGATC AGACCTAAAA CCAGTAAAGC TGTCTACAGT GCTGACTTTA AACACCAAGT ATTAACGACC ATGTTAAAGC AAGGTTTAAG TCAACCTGAG ACGGCACTAA AGTTCAACAT CAGCGCACCC GCTCTTATCA GCCATTGGCA TAAAGCGTAT CGACAGTATG GTATGTCTGG ACTCACTCCC AAACGACAAG GTAGAGGCGC CATGACCAAG CCCGTGATCA CAAACAAACC AGATGACGAC AAAACACCTG CTGAATTAAA GCGTGAACTG GCATACCTGC GTGCAGAGAA CGCCTACCTA AAAAAGCTCG ATGCCTTGCT CAGGGAAAGG GAACAAGCGG CGACAAAGCA AGGCTCATCG AAGGATTAA
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Protein sequence | MRYNLDFKIK IIAYYKQGHT GLATGKKFAV NPQFVRKWVK QYQSGGIEAI RPKTSKAVYS ADFKHQVLTT MLKQGLSQPE TALKFNISAP ALISHWHKAY RQYGMSGLTP KRQGRGAMTK PVITNKPDDD KTPAELKREL AYLRAENAYL KKLDALLRER EQAATKQGSS KD
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