Gene Psyc_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0007 
Symbol 
ID3514688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp9413 
End bp9931 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content45% 
IMG OID637668689 
ProductIS3/IS911 family transposase orfA 
Protein accessionYP_263315 
Protein GI71064588 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.875163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000690701 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTTACA ATCTAGACTT TAAGATCAAA ATCATCGCAT ACTACAAGCA AGGACATACC 
GGACTTGCTA CAGGTAAAAA GTTTGCAGTA AACCCCCAAT TTGTACGCAA ATGGGTAAAG
CAATACCAAA GCGGTGGTAT AGAAGCGATC AGACCTAAAA CCAGTAAAGC TGTCTACAGT
GCTGACTTTA AACACCAAGT ATTAACGACC ATGTTAAAGC AAGGTTTAAG TCAACCTGAG
ACGGCACTAA AGTTCAACAT CAGCGCACCC GCTCTTATCA GCCATTGGCA TAAAGCGTAT
CGACAGTATG GTATGTCTGG ACTCACTCCC AAACGACAAG GTAGAGGCGC CATGACCAAG
CCCGTGATCA CAAACAAACC AGATGACGAC AAAACACCTG CTGAATTAAA GCGTGAACTG
GCATACCTGC GTGCAGAGAA CGCCTACCTA AAAAAGCTCG ATGCCTTGCT CAGGGAAAGG
GAACAAGCGG CGACAAAGCA AGGCTCATCG AAGGATTAA
 
Protein sequence
MRYNLDFKIK IIAYYKQGHT GLATGKKFAV NPQFVRKWVK QYQSGGIEAI RPKTSKAVYS 
ADFKHQVLTT MLKQGLSQPE TALKFNISAP ALISHWHKAY RQYGMSGLTP KRQGRGAMTK
PVITNKPDDD KTPAELKREL AYLRAENAYL KKLDALLRER EQAATKQGSS KD