Gene Psyc_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0006 
Symbol 
ID3514687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp8586 
End bp9371 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content38% 
IMG OID637668688 
ProductIS3 family transposase 
Protein accessionYP_263314 
Protein GI71064587 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000149374 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGAAAA GCAGTTTCTA CTACCATAGA ACCATGCTAG GGGATAAAGA TAAATACGCT 
GACTTAAAAC AGCGTATCAC GGCGCTATAC CACAAGCATA AAGGCAGATA TGGCTATCGT
AGAATGACTG TCGCATTAAA ACAGTTAGGT GTTCATCATA ATCATAAGCT TATTGCCAAA
CTCATGAAAC AGTTGACACT CAGTGCAAAG ATAAGAAGAC AAAAGTACCG CTCCTATAAA
GGACAGCAAG GTAAAATAGC AAAGAATTAT TTAAAACGTC GGTTTAAAGC AAGCAAACCA
CATAAACGTT GGCTCACTGA TATTACTGAG TTTAAGGTAG GTGACCATAA GTTATATTTA
TCGCCAATAC TCGATTGTTA TAACAATGAG ATAGTCAGTT ATACGCTCTC AAGAAGGCCA
ACCTATGATT TGGTAAGCCA AATGCTTGAT AAGGCGTTGG ACAAGACTGG AAAACATCGT
CATAAGACAT TAATGCTACA TTCTGATCAG GGATGGCATT ATCAAATGAA GCCGTTTAGG
GAGATGCTTA AAAAGCATCA GATAAAACAG AGTATGAGCA GGAAAGGCAA CTGCTTGGAT
AATGCGTTAA TGGAGGGGTT CTTCGGTACG CTAAAGTGTG AGACTATCTA TATTGAGAAG
CCTAAAACGA TTGAAGCTTT AGAGAGACAG ATTCATGAGT ATATTCATTA CTACAATCAT
GAACGTATTC AGCTTAAACT AAAAGGACTG AGTCCTGTAC AGTACAGAAC TCAGTCTTTG
AAATAA
 
Protein sequence
MPKSSFYYHR TMLGDKDKYA DLKQRITALY HKHKGRYGYR RMTVALKQLG VHHNHKLIAK 
LMKQLTLSAK IRRQKYRSYK GQQGKIAKNY LKRRFKASKP HKRWLTDITE FKVGDHKLYL
SPILDCYNNE IVSYTLSRRP TYDLVSQMLD KALDKTGKHR HKTLMLHSDQ GWHYQMKPFR
EMLKKHQIKQ SMSRKGNCLD NALMEGFFGT LKCETIYIEK PKTIEALERQ IHEYIHYYNH
ERIQLKLKGL SPVQYRTQSL K