Gene Psyc_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0005 
Symbol 
ID3514686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp7907 
End bp8500 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content43% 
IMG OID637668687 
Producthypothetical protein 
Protein accessionYP_263313 
Protein GI71064586 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.33307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000135585 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATATAG AAATGATCGA AGTTATTTTA CTAGCGATAG CCTTGGCAAT GGATGCGTTT 
GCGGTATCAA TTGGCTTGGG CGCTAAGTCC CAAAAACAAT CGTCTGCTTA TGTTCTACGT
TTAGCTGTTT ACGCAGCGCT GTATTTTGGT ATCGCACAAG GTGTCATGCC GCTGATAGGT
TATTTGTTGG GTGCAGTATT GCTAGGCTGG TTGGCGACTG CTGCACCGTG GATTGGCGGT
GGTATTCTTA TTGTGCTTGG CGCTAAGATG TTATATGAAG CTTTTAATGG TGAGATTGAA
GCGGTACTAG AAGATGGTTT CGATGAAAAT ATACGAAAAA AAATCAACCA TCGTATGATG
TTTACACTGG CTATTGCCAC CAGTATTGAT GCGATGGCAG CAGGCTTCAC CTTAAATTTA
CTAGCACTTA ATGCATGGTT AGCGTGCTTA ATCATCGCTA TCGTCACTGC TGGATTTGGC
TTTTTTGGCA TCTATTTGGG TAAGTCTTCT GGAACTTGGC TTGAGGATAA AGCTGAAATA
TTAGGGGGGC TGGTGCTTAT TGCGATCGGC GTAAAGGTTA TGCTTTTTAG CTAA
 
Protein sequence
MDIEMIEVIL LAIALAMDAF AVSIGLGAKS QKQSSAYVLR LAVYAALYFG IAQGVMPLIG 
YLLGAVLLGW LATAAPWIGG GILIVLGAKM LYEAFNGEIE AVLEDGFDEN IRKKINHRMM
FTLAIATSID AMAAGFTLNL LALNAWLACL IIAIVTAGFG FFGIYLGKSS GTWLEDKAEI
LGGLVLIAIG VKVMLFS