| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | pE33L466_0380 |
|---|
| Symbol | npr |
|---|
| ID | 3399873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus E33L |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007103 |
|---|
| Strand | + |
|---|
| Start bp | 385514 |
|---|
| End bp | 387220 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637660197 |
|---|
| Product | neutral protease |
|---|
| Protein accession | YP_245861 |
|---|
| Protein GI | 67078241 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3227] Zinc metalloprotease (elastase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000306257 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATA AGAAGAATTT CGTGAAGATA GGATTAACTA CAGGAGTAAT GTTATCGGTG
ATTATGCCCT ATGGAGATGC ATATGCGGCA ACAGAAGATT TAAAAGTGGA AACAAAGGAA
GATACGTTCC GAACAGGTAA TTTAACAGTA CCTTCTCAAA AATCGGCAGA AAATGTAGCA
AAAGATGCGC TAAAAGGAAA AACAGAACAA GCATTATCAT CAAAGCAAGT TAATACGGAA
TCAAAAGTAA ATTATAATGT TACGCAAAGT CGTAAATCTT ATGATGGTAC TACATTGGTA
CGTCTTCAAC AAACATATGA AGGACGCGAT GTATACGGAT ATCAACTAAC AGCACATATT
AATGATGATG GTGTACTTAC GAGTGTTTCG GGGGATAGTG CCCAAGATCT ACAACAACAA
GAAGATTTGA AACAACCTAT TACTCTATCA GAAGAGGATG CAAAGAAGCA GCTTTTTAAA
ATCTATGGGG ATAATCTTAC ATTTGTTGAA GAACCAGAAA TTAAACAAGT GGTATATGTA
GATGAAAATA CAAATAAAGC TACAAGCGCA TACCAAATTA CTTTTAGTGC ATCTACACCT
GAATATGTAT CGGGTACGGT ATTAATTGAT GCTTTTGTTG GGGATCTATT AAAAGAACTC
GTTCAAAAAT TGGGTATACA AGTAGACAGC AGTATTGTTC AATCCGCAAC ATCAAATAAA
TCACAAGATC CTTCTAAATT AACAGGCACA GGAAAAGATG ACTTAGGTAT GAATCGTACA
TTTGGAATTT CACAACGAAG TGATGGAACG TACACTCTTG CAGATTATTC TCGTGGTAAG
GGAATTGAAA CGTATACTGC TAATTATAAA GATTATAATA ATTATAGAAG AAATATATGG
GGTTATTTGG ATGATTTAGT AACAAGTAAT TCTACAAATT TTACAGATCC TAAAGCAGTC
AGTGCACATT ATTTAGCAAC GAAAGTATAT GATTTTTATC AAGAAAAATA TAGCCGAAAC
AGCTTTGATA ATAATGGACA AAAAGTAATT TCTGTCGTTC ATGGCTGGAA TACAAATGGT
ACGAATAAAG GAAATCCTAA GCAATGGTTT AATGCATTTA GTAATGGGGC TATGCTGGTA
TACGGAGATC CAATTGTTAG AGCATTTGAT GTGGCAGGAC ATGAGTTTAC ACATGCGGTT
ACGAGAAATG AGTCTGGACT TGAGTACGCA GGGGAAGCTG GTGCAATTAA TGAAGCAATA
TCTGATATTT TAGGAGTAGC GGTTGAGAAG TATGCAAATA ACGGGAAATT TAATTGGACA
ATGGGAGAAC AATCAGGTCG TATTTTTAGA GATATGAAAA ATCCATCATC TATCTCTTCT
AGATATCCAG AAGATTATAG ACATTATAAC AATTTACCTA TTGATGCTGC CCATGATCAT
GGTGGTGTAC ACACGAACTC TAGTATTATT AATAAAGTAG CTTATTTGAT TGCTAGTGGT
GGAAATCATA ACGGAGTAAA TGTACAAGGC ATTGGAGAAG ATAAAATGTT TGATATTTTC
TATTATGCAA ATACGGATGA ATTAAATATG ACTTCTGACT TTAAAGAATT AAAAGAAGCT
TGTATTCGTG TAGCAACGAA CTTATATGGT AAGGATTCAT CAGAAGTACA AGCTGTCCAA
CAAGCCTTTA AAGCAGCTTA TATTTAA
|
|---|
| Protein sequence | MKNKKNFVKI GLTTGVMLSV IMPYGDAYAA TEDLKVETKE DTFRTGNLTV PSQKSAENVA
KDALKGKTEQ ALSSKQVNTE SKVNYNVTQS RKSYDGTTLV RLQQTYEGRD VYGYQLTAHI
NDDGVLTSVS GDSAQDLQQQ EDLKQPITLS EEDAKKQLFK IYGDNLTFVE EPEIKQVVYV
DENTNKATSA YQITFSASTP EYVSGTVLID AFVGDLLKEL VQKLGIQVDS SIVQSATSNK
SQDPSKLTGT GKDDLGMNRT FGISQRSDGT YTLADYSRGK GIETYTANYK DYNNYRRNIW
GYLDDLVTSN STNFTDPKAV SAHYLATKVY DFYQEKYSRN SFDNNGQKVI SVVHGWNTNG
TNKGNPKQWF NAFSNGAMLV YGDPIVRAFD VAGHEFTHAV TRNESGLEYA GEAGAINEAI
SDILGVAVEK YANNGKFNWT MGEQSGRIFR DMKNPSSISS RYPEDYRHYN NLPIDAAHDH
GGVHTNSSII NKVAYLIASG GNHNGVNVQG IGEDKMFDIF YYANTDELNM TSDFKELKEA
CIRVATNLYG KDSSEVQAVQ QAFKAAYI
|
|---|
| |