Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | pE33L466_0152 |
Symbol | ribD |
ID | 3399743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus E33L |
Kingdom | Bacteria |
Replicon accession | NC_007103 |
Strand | - |
Start bp | 160783 |
End bp | 161886 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637659986 |
Product | riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase) and 5-amino-6-(5-phosphoribosylamino)uracil reductase) |
Protein accession | YP_245650 |
Protein GI | 67078030 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD [TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGAGC ATGAATTGTA TATGAAGTTA GCACTAGAAA ATGCCAAGGC TATGAAGGGA CAAACGACTC CAAATCCACT GGTTGGATCT GTAATTGTAA ATGATAATCG AATTGTAGGG ATCGGAGCAC ATATGAAGGC CGGAGAACCA CATGCCGAAA TACATGCGAT ACGCATGGCG GGAGAACAGG CCCGTGGTGG TACAATCTAT GTAACTCTTG AACCTTGTTC TCATCATGGA AGAACAGGGC CTTGTGCAGA AGCAATTGTA CAAGCAGGGA TTAAGAAGGT AGTAGTTGCT ACACTTGATC CAAATCCACT TGTTTCTGGA CGTGGAATTA AAATTTTGCA AGATGCTGGT ATTGAAGTGC TTGTAGGAGT GTGTGAAGAA AAATCTAAAA AGATGAATGA AGTCTTTAAT AAATATATTA TGACAAAGCG CCCATTTGTA ACGATTAAAT CGGGTGTTAC ATTAGATGGA AAAATTGCTA CTTCTTTATC GGATAGTAAG TGGATTACAT CTACAGAAGC AAGACAGGAA GTACACCAAA TACGAAATGA AAATGCAGCT ATTTTAGTAG GAGCGAATAC GGTACAAAAG GATAATCCAT CATTAACAAC GCGTATTCCA AATGGACGAA ATCCAATACG AGTAATATTG GACTCAACAT TACGCATACC AATGGAAGCT AACGTTGTTA CAGATGTGGA AGCTCCTACC TGGATATTTA CAACAAGTAA TCATGCAGCG GAAAAAAGGA AGGCATTAGA AAATGCAGGA GTCAAAGTAT TTGTTACTAG CGGAGAAAAG CATATAAACT TACATGAAAT GCTTGATGTT TTAGGGCAAA AAGGAGTTTC CTCTCTGCTT ATTGAAGGTG GTGGAGAGGT AAATGCTTCG TTTATTGAAA ATAAATTGAT GGATAAACTT ATTTTATATT TCGCACCTAA AATTATTGGG GGAAGATTGG CGCCTAGCTT TGTAGAGGGG ACTGGCATTA CTAAAATGCA AGATGCAATT GAATTTAAGG ATATATCATT TACCCAGATT GGAAAAGATT ATAGATTTAT TGGCTATCCA GAATATCGGA AAGATGAGGA ATAA
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Protein sequence | MLEHELYMKL ALENAKAMKG QTTPNPLVGS VIVNDNRIVG IGAHMKAGEP HAEIHAIRMA GEQARGGTIY VTLEPCSHHG RTGPCAEAIV QAGIKKVVVA TLDPNPLVSG RGIKILQDAG IEVLVGVCEE KSKKMNEVFN KYIMTKRPFV TIKSGVTLDG KIATSLSDSK WITSTEARQE VHQIRNENAA ILVGANTVQK DNPSLTTRIP NGRNPIRVIL DSTLRIPMEA NVVTDVEAPT WIFTTSNHAA EKRKALENAG VKVFVTSGEK HINLHEMLDV LGQKGVSSLL IEGGGEVNAS FIENKLMDKL ILYFAPKIIG GRLAPSFVEG TGITKMQDAI EFKDISFTQI GKDYRFIGYP EYRKDEE
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