| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | pE33L466_0046 |
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| Symbol | opuD |
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| ID | 3399949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cereus E33L |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007103 |
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| Strand | + |
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| Start bp | 43534 |
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| End bp | 45132 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637659887 |
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| Product | glycine betaine transporter |
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| Protein accession | YP_245551 |
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| Protein GI | 67077931 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.275522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAA AAGAAAACAG TGTATTCTAT ATCTCCATCT TGCTTACAAC CTTATTTATT
ATATGGGGTG TAATTCCAGC AAGTTGGATA CAAGGCTATG ATTTACAAAG TGTTACCTCT
TCTCTAAACG TATTTATTCT CAATAAGTTT GGATGGTTTT ACTCTCTACT TATGACCACA
ATGATTGTTT TAGCTGGTTA TTTAGCATTT TCAAAGTATG GCTCTATTCG TCTTGGTAAA
GATGATGAAA AACCACAATA TAGTTACCTC TCTTGGCTTT CCATGTTATT TGGAGCAGGA
ATGGGCATCG GACTTCTCTT TTATGGAATT ACTGAACCCA TTTCACACTT TGGAGCACCG
CTTACTGGTG AACCTGGAAC TGAGGAAAGC GCTAAAGTTG CTATGCAATA TTCATTTTTC
CACTGGGGTC TCTTCCCTTG GTCACTTTAT GCAATAGTCG CTCTAACAAT TGCATATTTT
ACATTCCGAA AACAAAAGGG TAGTACAATT GGCGCTACAG TTACTCCATT ATTTAATCGA
TCGAAACATT CTCCTATTGG AAAAACAGTA GATATTTTAG CTGTTTTAGC AACTGTATTT
GGAATCGTAC CATCCGTAGG AATCGGTGCA CAACAAATCG CTGGAGGATT AAGCTATTTA
TTACCTTCTA TTAATAATAC AATTGGTACA CACCTCGTAC TTATTGCCAT TTTCACTGTA
CTCTATTTAA CAAGTGCACA AACTGGCTTA GATCGTGGGA TTAAATATTT GAGTAACTTA
AACTTCTCCC TCGCTGGAAT ATTACTCGTT TCCTTTTTAA TTTTAGGACC AACTGTCTTT
ATCATGAAGT ATTTTACTTC CACACTAGGC TCTTATATCG AAGCATTACC AAGCATGGGA
TTAAATTTAG GTGCTTTTAG CAAAGAATCC TCTTCTTGGA TTGAAAATTG GACTATTTTT
TACTGGGGTT GGTGGATTTC TTGGTCTCCA TTCGTCGGTA CATTCATTGC CCGTGTTTCT
CGCGGACGTA CAATTCGTGA ATTTATTATC GGCGTCGTAT TAATCCCAAC ATTCATTTGT
ACATTTTGGT TCGCTGTCTT TGGCGGTACA GCTATTCATA TGGAAATGTT CCAATCACTT
GGAATTGCTG ATGAAATTGC GAAAAATGGT ACCGAAATTG GGTTATTTGC TGTCATTTCA
CATTTACCAT TCTCAACATT TTTGACCATT ATTGGACTAA TTTTAATCGC AACATTCTTC
GTTACCTCTG CTGACTCCGC AACATTTGTT GTTGCTATGC AAACAAGCAA TGGTAACTTA
TCACCAAAAA ACAGTTTGAA GCTTATTTGG GGATTAACAA TTACAGCTAT TGCAGCCATT
CTCTTGCAAG CTGGTGGGTT AAATGCACTG CAAATTGCAG CGATCATAGC AGCTTTACCA
TTCTCTATTG TAGTCGTTCT TATGGTCACG TCGCTCTTTA AAGAATTACG AAAAGAGAAT
ATCATTACTC AAACGAAACA ATCACCGCAA AAAATAAAAA AGTTATATAA TAGAAAAGCA
CCTCTTCCTG AACTGTACCC TATAAAATGG ACATTTTAA
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| Protein sequence | MIKKENSVFY ISILLTTLFI IWGVIPASWI QGYDLQSVTS SLNVFILNKF GWFYSLLMTT
MIVLAGYLAF SKYGSIRLGK DDEKPQYSYL SWLSMLFGAG MGIGLLFYGI TEPISHFGAP
LTGEPGTEES AKVAMQYSFF HWGLFPWSLY AIVALTIAYF TFRKQKGSTI GATVTPLFNR
SKHSPIGKTV DILAVLATVF GIVPSVGIGA QQIAGGLSYL LPSINNTIGT HLVLIAIFTV
LYLTSAQTGL DRGIKYLSNL NFSLAGILLV SFLILGPTVF IMKYFTSTLG SYIEALPSMG
LNLGAFSKES SSWIENWTIF YWGWWISWSP FVGTFIARVS RGRTIREFII GVVLIPTFIC
TFWFAVFGGT AIHMEMFQSL GIADEIAKNG TEIGLFAVIS HLPFSTFLTI IGLILIATFF
VTSADSATFV VAMQTSNGNL SPKNSLKLIW GLTITAIAAI LLQAGGLNAL QIAAIIAALP
FSIVVVLMVT SLFKELRKEN IITQTKQSPQ KIKKLYNRKA PLPELYPIKW TF
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