Gene Psyr_5135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5135 
Symbol 
ID3370693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp6092324 
End bp6092569 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content55% 
IMG OID637655510 
Producthypothetical protein 
Protein accessionYP_238200 
Protein GI66048359 
COG category[S] Function unknown 
COG ID[COG0759] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00278] conserved hypothetical protein YidD 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAC TGGCACTCGT TCCGATCCAG TTTTATCGCT ATGCCATTAG CCCGCTGATG 
GCCAGTCACT GTCGTTTCTA CCCCAGTTGC TCCTGCTACG CGTATGAAGC CATCGAGAAT
CATGGCCTTT TGCGCGGTGG CTGGCTGTCA ATTCGTCGTC TTGGTCGCTG TCACCCATGG
AATCCCGGTG GTTATGACCC GGTTCCAGCT GTCCCCACCT CCCGTTCTTC TTCGATGGCC
GAGTAA
 
Protein sequence
MRKLALVPIQ FYRYAISPLM ASHCRFYPSC SCYAYEAIEN HGLLRGGWLS IRRLGRCHPW 
NPGGYDPVPA VPTSRSSSMA E