| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_5133 |
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| Symbol | trmE |
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| ID | 3370691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 6089181 |
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| End bp | 6090551 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637655508 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_238198 |
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| Protein GI | 66048357 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTTC CTCGTGAAAC CATTGCCGCC ATCGCCACAG CCCAAGGGCG TGGCGGTGTG
GGTATCATCC GGGTGTCAGG TCCTCTGGCG GGCAAGGCCG CCGAAGCCAT TATCGGTCGG
ACCCTCAAGC CACGATTTGC CCACTACGGA CCTTTTGTAG ATGGCACCGG GCAGGTGCTC
GATGAAGGTA TCGCACTGTA TTTTCCGGGA CCCAACTCGT TCACCGGCGA GGATGTACTG
GAACTTCAGG GTCATGGCGG CCCCATCGTT CTGGACATGC TGCTGCAGCG CTGCCTGCAA
CTGGGCAGCC GCCTGGCTCG TCCGGGAGAG TTCAGTGAGC GTGCGTTTCT CAATGACAAG
CTCGATCTTG CCCAGGCGGA AGCGATTGCC GACCTGATCG AGGCGAGTTC TGCACAGGCA
GCGCGCAATG CACTGCGCTC GCTGCAGGGC GCTTTCTCGC GGCGTGTGGA TAACTTGACC
GAGAAATTGA TCAGCCTGCG TATCTACGTA GAGGCTGCAA TCGACTTCCC CGAAGAGGAA
ATCGACTTCC TTGCCGATGG CCACGTTCTG AACATGCTCG ATGACGTGCG TGCCGAGTTA
TCCACAGTGC TGCGTGAAGC CGGGCAGGGT GCCTTGTTAC GCGACGGCAT GACCGTGGTG
ATTGCCGGAC GCCCCAATGC GGGCAAATCC AGTCTGCTGA ACGCTCTGGC GGGCAGGGAG
GCGGCGATTG TCACCGAGAT CGCCGGCACC ACCCGCGATG TACTGCGAGA ACATATCCAC
ATAGATGGAA TGCCCTTGCA TGTCGTCGAC ACCGCAGGGC TGCGGGATAC TCAAGACCAG
GTGGAAATGA TCGGCGTGCA GCGCGCACTC AAGGCCATCG GCGAAGCTGA CCGGATTCTG
CTGGTGGTGG ATGCGACCGC GCCGGAGGCA GCCGACCCGT TTGCACTGTG GCCCGAATTT
CTCGAGCAGC GCCCGGACCC GTCGAAAGTC ACGCTGATAC GCAACAAGGC AGATCTGAGT
GGAGACCCCA TCAATCTGCA GACCAGCGTT GATGGCCACG TCACCATCAG CCTGAGCGCC
AGGTCTGGTG GCGAAGGGCT TGAACTGCTG CGCGAACATC TCAAGGCCTG CATGGGCTAT
GAACAAACCT CGGAAAGCAG CTTCAGCGCG CGTCGACGCC ACCTTGAGGC GCTGCGCCAT
GCCAGTGACT CGCTGGAACA CGGCAGGGCT CAACTCACCC TGGCGGGCGC TGGAGAGCTG
CTGGCCGAAG ACTTGCGTCA GGCACAGCAA GCGCTTGGCG AGATTACCGG CGCATTCAGT
TCCGACGACC TGCTTGGCAG AATCTTCTCC AGCTTCTGCA TCGGCAAGTA A
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| Protein sequence | MNVPRETIAA IATAQGRGGV GIIRVSGPLA GKAAEAIIGR TLKPRFAHYG PFVDGTGQVL
DEGIALYFPG PNSFTGEDVL ELQGHGGPIV LDMLLQRCLQ LGSRLARPGE FSERAFLNDK
LDLAQAEAIA DLIEASSAQA ARNALRSLQG AFSRRVDNLT EKLISLRIYV EAAIDFPEEE
IDFLADGHVL NMLDDVRAEL STVLREAGQG ALLRDGMTVV IAGRPNAGKS SLLNALAGRE
AAIVTEIAGT TRDVLREHIH IDGMPLHVVD TAGLRDTQDQ VEMIGVQRAL KAIGEADRIL
LVVDATAPEA ADPFALWPEF LEQRPDPSKV TLIRNKADLS GDPINLQTSV DGHVTISLSA
RSGGEGLELL REHLKACMGY EQTSESSFSA RRRHLEALRH ASDSLEHGRA QLTLAGAGEL
LAEDLRQAQQ ALGEITGAFS SDDLLGRIFS SFCIGK
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