Gene Psyr_5121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5121 
Symbol 
ID3370679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp6077582 
End bp6078961 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content58% 
IMG OID637655496 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_238186 
Protein GI66048345 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCG GACGTATCGT TCAAATCATC GGCGCCGTGA TCGACGTGGA ATTCCCACGC 
GATAGCGTAC CGAGTATCTA CAACGCGCTG GAAGTTCAGA GCGCGGCAGG AACCACCCTG
GAAGTTCAGC AGCAGCTGGG CGACGGCGTG GTTCGTACCA TTGCGATGGG CTCCACCGAG
GGCTTGAAGC GTGGTCTGGA AGTCACAGAC TCTGGCGCAG CCATCTCCGT ACCGGTCGGT
AAAGCGACGC TGGGCCGGAT CATGGACGTG CTGGGCAACC CGATCGACGA AGCTGGCCCG
ATCGCCACCG AAGAGCGCTG GGGCATTCAC CGTCCTGCAC CGTCCTTCGC TGAGCAGGCA
GGCGGCAACG ACCTTCTGGA AACCGGCATC AAGGTTATCG ACCTGGTCTG CCCGTTCGCC
AAAGGCGGTA AAGTCGGTCT GTTCGGTGGT GCCGGTGTCG GCAAGACCGT AAACATGATG
GAACTGATCC GTAACATCGC CATCGAGCAC AGCGGTTATT CCGTGTTCGC CGGTGTGGGT
GAGCGTACTC GTGAGGGTAA CGACTTCTAC CACGAGATGA AGGACTCCAA CGTTCTGGAC
AAAGTGGCAC TGGTCTACGG TCAGATGAAC GAGCCGCCGG GTAACCGTCT GCGCGTAGCA
CTGACCGGCC TGACCATGGC CGAGAAGTTC CGTGACGAAG GTAACGACGT TCTGCTGTTC
GTCGACAACA TCTATCGTTA CACCCTGGCC GGTACCGAAG TATCCGCACT GCTGGGCCGT
ATGCCTTCCG CAGTAGGTTA CCAGCCGACC CTGGCTGAAG AGATGGGCAC TCTGCAAGAG
CGCATCACTT CCACCAAGAA TGGTTCGATC ACCTCGATCC AGGCCGTATA CGTACCAGCG
GACGACTTGA CTGACCCGTC GCCAGCGACC ACGTTTGCCC ACTTGGACGC CACCGTCGTA
CTGTCCCGTG ACATCGCCTC CCTGGGTATC TACCCGGCGG TAGATCCACT GGACTCGACT
TCGCGCCAGC TGGACCCGAA CGTCATTGGC CAGGAACACT ACGACACCGC TCGCGGCGTT
CAGTATGTGT TGCAGCGCTA CAAAGAGCTG AAAGACATCA TCGCGATCCT GGGTATGGAC
GAGTTGTCGG AGACCGACAA GCAGTTGGTT AACCGTGCTC GTAAGATCCA GCGCTTCCTG
TCCCAGCCTT TCTTCGTGGC AGAAGTCTTC ACCGGTGCTT CGGGTAAATA CGTTTCCCTG
AAAGACACCA TTGCTGGCTT CAAAGGCATC CTCAACGGTG ACTACGACCA CCTGCCAGAA
CAAGCGTTCT ACATGGTCGG CGGCATCGAA GAAGCGATCG AGAAAGCCAA GAAACTGTAA
 
Protein sequence
MSSGRIVQII GAVIDVEFPR DSVPSIYNAL EVQSAAGTTL EVQQQLGDGV VRTIAMGSTE 
GLKRGLEVTD SGAAISVPVG KATLGRIMDV LGNPIDEAGP IATEERWGIH RPAPSFAEQA
GGNDLLETGI KVIDLVCPFA KGGKVGLFGG AGVGKTVNMM ELIRNIAIEH SGYSVFAGVG
ERTREGNDFY HEMKDSNVLD KVALVYGQMN EPPGNRLRVA LTGLTMAEKF RDEGNDVLLF
VDNIYRYTLA GTEVSALLGR MPSAVGYQPT LAEEMGTLQE RITSTKNGSI TSIQAVYVPA
DDLTDPSPAT TFAHLDATVV LSRDIASLGI YPAVDPLDST SRQLDPNVIG QEHYDTARGV
QYVLQRYKEL KDIIAILGMD ELSETDKQLV NRARKIQRFL SQPFFVAEVF TGASGKYVSL
KDTIAGFKGI LNGDYDHLPE QAFYMVGGIE EAIEKAKKL