Gene Psyr_5119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5119 
Symbol 
ID3370677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp6075620 
End bp6076987 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content60% 
IMG OID637655494 
ProductUDP-N-acetylglucosamine pyrophosphorylase 
Protein accessionYP_238184 
Protein GI66048343 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTCG ATATCGTTAT TCTCGCTGCT GGCCAAGGTA CCCGGATGCG TTCCGCGCTG 
CCGAAGGTTC TGCACCCCGT GGCCGGCAAT TCCATGCTGG GTCATGTTAT CCACAGCGCG
CGTCAGTTAT CCCCAAGTGG CATACATGTC GTGATCGGCC ACGGCGCTGA TGCCGTGCGT
GAGCAGCTGT CAGCCGATGA CTTGAATTTC GTGATGCAGG ACAAGCAACT CGGTACCGGC
CATGCGGTTG CTCAGGCGCT GCCCGCGCTC ACGGCTGACA CCGTATTGAT TCTTTATGGC
GATGTACCGT TGATCGAAGT GGAAACGCTT TCGCGCCTGC TCGAACGGGT CAACCCGCAG
CAACTGGGTC TGCTGACCGT TGCGCTGGAT GACCCTACCG GTTACGGCCG TATCGTTCGC
GATGATCAGA ATCGTGTCTG TGCCATCGTT GAGCATAAAG ACGCGAGTGA CGCGCAGAAG
GCTATTACCG AAGGCAATAC CGGCATTCTC GCCGTGCCGG CCGCTCATCT CGCTGACTGG
CTGGGGCGGC TGTCCAACAA CAATGCCCAG GGCGAGTATT ACCTCACCGA CGTGATCGCC
ATGGCGGCTA ATGACGGCCT GGTGGTTGCC ACAGAGCAGC CCCACGACGC GATGGAAGTG
CAGGGCGCCA ATGATCGCAA GCAGCTTTCC GAGCTGGAGC GTCATTACCA GATGCGCGAA
GCCCGCCGTC TGATGGCGGC TGGCGTGACC CTGCGCGACC CTGCGCGCTT CGATGTGCGC
GGTGAAGTCA TTGTCGGGCG CGACGTGCTG ATCGATATCA ATGTGATTCT TGAGGGCAAG
GTCGTGATCG AGGATGACGT GGTCATCGGT CCGAACTGCG TCATCAAGGA CAGCACCCTG
CGCAAGGGTG TCGTCGTTAA AGCCAACAGC CACATCGAAG GCGCAATCCT GGGTGAGGGC
AGCGATGCCG GCCCGTTTGC ACGCCTGCGA CCAGGCAGCG TGCTGGGTGC CAAGGCGCAT
GTGGGTAACT TTGTCGAGCT CAAGAATGCG AACCTGGGCG AGGGCGCCAA GGTCGGCCAC
CTGACGTATC TGGGCGACGC CGAAATTGGC GCACGCACCA ATATCGGTGC CGGCACCATT
ACCTGTAACT ACGATGGTGC CAACAAGCAC AAGACCACGT TGGGTGCAGA CGTCTTCATC
GGTTCCAACA ACTCTCTGGT TGCGCCTGTG GATATCCTGG ACGGTGCGAC GACTGCAGCC
GGTTCGACCA TCACCCAGAA CGTGCCTGCT GAACAACTCG GCGTAGCCCG CGCCCGCCAA
CGCAATATCG AAGGCTGGAA GCGTCCGGTG AAAATCAGCA AAGACTGA
 
Protein sequence
MSLDIVILAA GQGTRMRSAL PKVLHPVAGN SMLGHVIHSA RQLSPSGIHV VIGHGADAVR 
EQLSADDLNF VMQDKQLGTG HAVAQALPAL TADTVLILYG DVPLIEVETL SRLLERVNPQ
QLGLLTVALD DPTGYGRIVR DDQNRVCAIV EHKDASDAQK AITEGNTGIL AVPAAHLADW
LGRLSNNNAQ GEYYLTDVIA MAANDGLVVA TEQPHDAMEV QGANDRKQLS ELERHYQMRE
ARRLMAAGVT LRDPARFDVR GEVIVGRDVL IDINVILEGK VVIEDDVVIG PNCVIKDSTL
RKGVVVKANS HIEGAILGEG SDAGPFARLR PGSVLGAKAH VGNFVELKNA NLGEGAKVGH
LTYLGDAEIG ARTNIGAGTI TCNYDGANKH KTTLGADVFI GSNNSLVAPV DILDGATTAA
GSTITQNVPA EQLGVARARQ RNIEGWKRPV KISKD