Gene Psyr_5112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5112 
Symbol 
ID3370670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp6063869 
End bp6064690 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content56% 
IMG OID637655487 
Producthypothetical protein 
Protein accessionYP_238177 
Protein GI66048336 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAC TGGACGATAT TTTTCATGAG TTACACAACC ATGGTCTTTT GATCCTGGCC 
AATGTCAGCG ATGCAGGCGG GGCAAAAGTC TTAGAGTCAT TGGGTGCCAC CGCGATCGCC
ACCAGCAGTG CAGGCATGGC GTGGGCGCAC GGTTACGCCG ATGGCAACCA GCTCCCCCTT
ACGCGGCTGG CAGCCAGCGT TGAATCTATG ACGCGAATAC TGCGCGTGCC CCTGACCGTA
GACATTGAGG CCGGTTACTC CGAGGATCTT CAACATGTCG CCAGCGTTGT CGAAGCGGTT
GTCGCCGCAG GTGCCGTGGG TATCAACATC GAAGACGGTA CCGCACCACC GGAAGTACTT
GTGCAGAAAA TCGAAGTTGC CCGAGAAGTC GCCGACAAGC ATGGTATTAA TCTATTCATC
AATGCGCGCA GTGATGTCTA TCTGAAAAGC CTGGTGCCAC CCGTCCAGCG TCTGGATGAA
ATCATCCGGC GTGCAGCGCT TTATGCTCAA GCAGGAGCCA ACGGTCTGTT CGCCGCCGGT
ATGGTCACAC CGGCCGAGAT TTCCACACTG TGCAACAACT GCACGCTACC GGTGAACCTG
CTTGCACGCG ATGGGCTGTC GGCACCCGGC GATCTGGAGC GCTTAGGCGT TAGACGCCTG
AGCGCCGGTT CCAGTATTGC GGAGTTTCTG TATGGAGCGA TGGAAGGGCT GGCGCGCTCT
TTCATCGAGC GCGGGCAGCT GGATACGCAA GCGCTTACGG GTTTTACGTA TGCAAAGTTG
AATGGGTTAA TAGGGAGCGT GGATAAAGCA ACAGGCCCAT AG
 
Protein sequence
MKSLDDIFHE LHNHGLLILA NVSDAGGAKV LESLGATAIA TSSAGMAWAH GYADGNQLPL 
TRLAASVESM TRILRVPLTV DIEAGYSEDL QHVASVVEAV VAAGAVGINI EDGTAPPEVL
VQKIEVAREV ADKHGINLFI NARSDVYLKS LVPPVQRLDE IIRRAALYAQ AGANGLFAAG
MVTPAEISTL CNNCTLPVNL LARDGLSAPG DLERLGVRRL SAGSSIAEFL YGAMEGLARS
FIERGQLDTQ ALTGFTYAKL NGLIGSVDKA TGP