| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_5106 |
|---|
| Symbol | |
|---|
| ID | 3370664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 6058111 |
|---|
| End bp | 6059106 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637655481 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_238171 |
|---|
| Protein GI | 66048330 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTAC TGGTGACAGG TGCTGCAGGG TTCATCGGGT TTCATGTCGC CAAGCGTCTG
TGCGAGCTCG GCGTAGAGGT CGTCGGCATC GACAACCTCA ACGATTACTA CAGCGTCGAG
CTCAAACAAT CGCGCCTGGC CCTACTCCAG CGCCTGCCAG GTTTCACGTT CCACAGGCTG
GACATCACCG ATGCCGAAGG GCTGTCCGCG CTCTTCGCGC AAAATGGCTT CGAACAGGTC
ATTCATCTGG CGGCTCAGGC CGGTGTGCGT TATTCGCTTG AACAACCGAA TGTTTACGCC
CAATCCAATC TGGTCGGCTT TATCAACGTG CTCGAGGCCT GTCGGCAGTA TCGACCGGCG
CACCTGATCT ACGCGTCGAG CAGCTCGGTC TACGGCGCCA ATACGCGCAT GCCGTTTCAG
GTCGAGGATG CGGTCGACCG GCCGCTGTCC CTGTATGCCG CCACCAAGCG CGCCAACGAA
CTCACCGCCT ACAGCTATTG CCACTTGTAC GGCCTGCGCG CCACAGGGCT GCGCTTTTTC
ACCGTCTACG GCCCCTGGGG CCGGCCGGAC ATGGCGCTGT TCAAGTTCAC CAAAGCCATG
CTGGCCGGCC AGCCTGTGGA TATCTACAAC CACGGCGAAA TGGCGCGGGA CTTCACCTAC
ATCGACGACA TTGTCGAAAG CATCCTGCGC CTGCGTCTGC TGCCGCCCGA TGCGGTTGGC
AGCGAGCCGC CCCATCAACT CTTCAACATC GGACGGGGTC AGCCCGTCAA GCTGCTGGAG
TTCGTCGATT GCCTGGAGGC CGCGCTAGGC CTGCGCGCGG AACGGCGCTA CCTGCCCTTG
CAAGCGGGCG ACGTGCTGCA AACCTGGGCT GACGTCAGTG CGCTGAGCCA ATGGATCGAC
TTTCAACCAC AGGTCTCGGT CGACACCGGC GTCAGGGCCT TCGTCGACTG GTATCGGGAG
CACTATCAGG CCCGGATCTG CGAGCCACTT CAATAA
|
|---|
| Protein sequence | MTVLVTGAAG FIGFHVAKRL CELGVEVVGI DNLNDYYSVE LKQSRLALLQ RLPGFTFHRL
DITDAEGLSA LFAQNGFEQV IHLAAQAGVR YSLEQPNVYA QSNLVGFINV LEACRQYRPA
HLIYASSSSV YGANTRMPFQ VEDAVDRPLS LYAATKRANE LTAYSYCHLY GLRATGLRFF
TVYGPWGRPD MALFKFTKAM LAGQPVDIYN HGEMARDFTY IDDIVESILR LRLLPPDAVG
SEPPHQLFNI GRGQPVKLLE FVDCLEAALG LRAERRYLPL QAGDVLQTWA DVSALSQWID
FQPQVSVDTG VRAFVDWYRE HYQARICEPL Q
|
|---|
| |