Gene Psyr_5100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5100 
Symbol 
ID3370658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp6052034 
End bp6052981 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content61% 
IMG OID637655475 
Producthypothetical protein 
Protein accessionYP_238165 
Protein GI66048324 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCATC CCCTCCCCGA CAGCGCCGCG CTGATTGCCC TGGCGCAGCG TCTTGAAACC 
AGCGGCTATC GCTTTATCAC GCCCACGCCC CTGACTCATC AACACGTCAA TCAACGCCCG
GAAAATCGTA CTGCCGCGTC ACTGCGCGAT GTGTTCGGCT GGAGTCGGCT GATACCGGAG
TCCATGCTGC CGGTCGAGGA GGCTCAAGGG TTGCTGGCTG CCGGTATTCT GGAACGTAAG
GAAGACGGCT TGAAAAGCCG GGTGAGATTT TCCAGCCTGG ATGATCTGCT GCTGGTGCAT
TCGGCGTTTC CTACCTCAGA TGAAGACTCG GTGTTTTTCG GTCCGGATAC CTACCGCTTC
GCGCAGTCCA TCAATCGCCA TCTGCAAGGT ACGTCGCATC CGGTCAACCG CGCCGTCGAC
ATCGGCTGTG GCACGGGTGC CGGCGCCATG TTGATCGCGG TCGCCCGTCC GCAGGCACAG
GTCCACGCCG TCGACATCAA CCCCAAGGCG CTGCATTTCG CACAGACCAA TGCGGCAGTC
GCCGGGCTGA AGAATATGGA GTGCTGCCAC AGCGATATTC TTTCGGGCCT GAGCGGAAAT
TTCGACCTGA TCGTCGCCAA TCCGCCCTAC ATGAAAGACA CCCAGCGCCG CGCCTACCGC
CACGGAGGTG ATGCACTGGG CGCAGACCTG TCTGTGCGCA TCCTGCGCGA GTCACTGGAC
CGCCTCACTC CGGGCGGCTC GCTGGTGCTT TACACCGGCG TGGCCATGGT GGGCGAGCAC
GATCCGTTTT TCGAAGCGGT GCAGGCCGAT ATCGACCATG CGGCACTGAC ATGGACCTAC
CGCGAACTGG ACCCGGATGT CTTCGGCGAA GAGCTGCTTG AAGAGGGTTA CGAAGACGTG
GACCGTATTG CAGCGGTGGA GCTGGTGGTC ACCCGACGCC CCGCATGA
 
Protein sequence
MSHPLPDSAA LIALAQRLET SGYRFITPTP LTHQHVNQRP ENRTAASLRD VFGWSRLIPE 
SMLPVEEAQG LLAAGILERK EDGLKSRVRF SSLDDLLLVH SAFPTSDEDS VFFGPDTYRF
AQSINRHLQG TSHPVNRAVD IGCGTGAGAM LIAVARPQAQ VHAVDINPKA LHFAQTNAAV
AGLKNMECCH SDILSGLSGN FDLIVANPPY MKDTQRRAYR HGGDALGADL SVRILRESLD
RLTPGGSLVL YTGVAMVGEH DPFFEAVQAD IDHAALTWTY RELDPDVFGE ELLEEGYEDV
DRIAAVELVV TRRPA