Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_5100 |
Symbol | |
ID | 3370658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 6052034 |
End bp | 6052981 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637655475 |
Product | hypothetical protein |
Protein accession | YP_238165 |
Protein GI | 66048324 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2890] Methylase of polypeptide chain release factors |
TIGRFAM ID | [TIGR00536] HemK family putative methylases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTCATC CCCTCCCCGA CAGCGCCGCG CTGATTGCCC TGGCGCAGCG TCTTGAAACC AGCGGCTATC GCTTTATCAC GCCCACGCCC CTGACTCATC AACACGTCAA TCAACGCCCG GAAAATCGTA CTGCCGCGTC ACTGCGCGAT GTGTTCGGCT GGAGTCGGCT GATACCGGAG TCCATGCTGC CGGTCGAGGA GGCTCAAGGG TTGCTGGCTG CCGGTATTCT GGAACGTAAG GAAGACGGCT TGAAAAGCCG GGTGAGATTT TCCAGCCTGG ATGATCTGCT GCTGGTGCAT TCGGCGTTTC CTACCTCAGA TGAAGACTCG GTGTTTTTCG GTCCGGATAC CTACCGCTTC GCGCAGTCCA TCAATCGCCA TCTGCAAGGT ACGTCGCATC CGGTCAACCG CGCCGTCGAC ATCGGCTGTG GCACGGGTGC CGGCGCCATG TTGATCGCGG TCGCCCGTCC GCAGGCACAG GTCCACGCCG TCGACATCAA CCCCAAGGCG CTGCATTTCG CACAGACCAA TGCGGCAGTC GCCGGGCTGA AGAATATGGA GTGCTGCCAC AGCGATATTC TTTCGGGCCT GAGCGGAAAT TTCGACCTGA TCGTCGCCAA TCCGCCCTAC ATGAAAGACA CCCAGCGCCG CGCCTACCGC CACGGAGGTG ATGCACTGGG CGCAGACCTG TCTGTGCGCA TCCTGCGCGA GTCACTGGAC CGCCTCACTC CGGGCGGCTC GCTGGTGCTT TACACCGGCG TGGCCATGGT GGGCGAGCAC GATCCGTTTT TCGAAGCGGT GCAGGCCGAT ATCGACCATG CGGCACTGAC ATGGACCTAC CGCGAACTGG ACCCGGATGT CTTCGGCGAA GAGCTGCTTG AAGAGGGTTA CGAAGACGTG GACCGTATTG CAGCGGTGGA GCTGGTGGTC ACCCGACGCC CCGCATGA
|
Protein sequence | MSHPLPDSAA LIALAQRLET SGYRFITPTP LTHQHVNQRP ENRTAASLRD VFGWSRLIPE SMLPVEEAQG LLAAGILERK EDGLKSRVRF SSLDDLLLVH SAFPTSDEDS VFFGPDTYRF AQSINRHLQG TSHPVNRAVD IGCGTGAGAM LIAVARPQAQ VHAVDINPKA LHFAQTNAAV AGLKNMECCH SDILSGLSGN FDLIVANPPY MKDTQRRAYR HGGDALGADL SVRILRESLD RLTPGGSLVL YTGVAMVGEH DPFFEAVQAD IDHAALTWTY RELDPDVFGE ELLEEGYEDV DRIAAVELVV TRRPA
|
| |