Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_5098 |
Symbol | |
ID | 3370656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 6049733 |
End bp | 6050251 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637655473 |
Product | hypothetical protein |
Protein accession | YP_238163 |
Protein GI | 66048322 |
COG category | [S] Function unknown |
COG ID | [COG3652] Predicted outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAATT ATTTTCGCAT GAGCGCCATT GCCGTTGTAC TTTCGCTAGG TTCGCAAATG GCTGTTGCTG CTCAGGACGC TGATGATTTC GTAGAAGACG CTTCTGCTAA AGGCATCGCC GAAGTTCAGG TTGGCAAGCT CGCACAGGAT GAGAAAGGTG TCTCTGCAGA TGTGAAGGAA TTTGCAAAGC AGATGGTCAC GGATCACACC GCCGCCAATG AGAAGCTGGC TGCAATCGCA AAAAGCAAGA ACCTTGAAGT GTCTGAAGAC CCTATGCTGA TGGATAAAGC CAAGGCAATG ATTCTGGAGA TGCGCGAGAA GTCGTTCGAC CAGGCGTACG CCAACAATCA GGTCTCCGCA CATGAGCAGG CGATCAAGCT GTACAAGGAA GAGGCCGAGA ATGGCAAGGA TCCAGAGCTG AAGGCGTTTG CAAAGGCAAC GCTGCCTACG CTGGAGAAGC ATCTGGAGCA TGCGAAAAAA CTCGCTGCTG CGCATGGCGG TGATGCTGCC AAGAAGTAA
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Protein sequence | MNNYFRMSAI AVVLSLGSQM AVAAQDADDF VEDASAKGIA EVQVGKLAQD EKGVSADVKE FAKQMVTDHT AANEKLAAIA KSKNLEVSED PMLMDKAKAM ILEMREKSFD QAYANNQVSA HEQAIKLYKE EAENGKDPEL KAFAKATLPT LEKHLEHAKK LAAAHGGDAA KK
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