Gene Psyr_5098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5098 
Symbol 
ID3370656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp6049733 
End bp6050251 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content52% 
IMG OID637655473 
Producthypothetical protein 
Protein accessionYP_238163 
Protein GI66048322 
COG category[S] Function unknown 
COG ID[COG3652] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATT ATTTTCGCAT GAGCGCCATT GCCGTTGTAC TTTCGCTAGG TTCGCAAATG 
GCTGTTGCTG CTCAGGACGC TGATGATTTC GTAGAAGACG CTTCTGCTAA AGGCATCGCC
GAAGTTCAGG TTGGCAAGCT CGCACAGGAT GAGAAAGGTG TCTCTGCAGA TGTGAAGGAA
TTTGCAAAGC AGATGGTCAC GGATCACACC GCCGCCAATG AGAAGCTGGC TGCAATCGCA
AAAAGCAAGA ACCTTGAAGT GTCTGAAGAC CCTATGCTGA TGGATAAAGC CAAGGCAATG
ATTCTGGAGA TGCGCGAGAA GTCGTTCGAC CAGGCGTACG CCAACAATCA GGTCTCCGCA
CATGAGCAGG CGATCAAGCT GTACAAGGAA GAGGCCGAGA ATGGCAAGGA TCCAGAGCTG
AAGGCGTTTG CAAAGGCAAC GCTGCCTACG CTGGAGAAGC ATCTGGAGCA TGCGAAAAAA
CTCGCTGCTG CGCATGGCGG TGATGCTGCC AAGAAGTAA
 
Protein sequence
MNNYFRMSAI AVVLSLGSQM AVAAQDADDF VEDASAKGIA EVQVGKLAQD EKGVSADVKE 
FAKQMVTDHT AANEKLAAIA KSKNLEVSED PMLMDKAKAM ILEMREKSFD QAYANNQVSA
HEQAIKLYKE EAENGKDPEL KAFAKATLPT LEKHLEHAKK LAAAHGGDAA KK