| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_5089 |
|---|
| Symbol | |
|---|
| ID | 3370647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 6038078 |
|---|
| End bp | 6039145 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637655464 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | YP_238154 |
|---|
| Protein GI | 66048313 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAAC CTGAATCCTA CGGCAAGGCC GCTATGGCAG TGCGGCTGAT CGCGTTGCTG
ATGCTGGCGC TGGTCATTGC GGTTGCCGAC ACCTTGACCG ACCTGGAAAT CGCCGTGGGC
GTATTTCAGA TTGTGGTGGT GCTGCTGGCG GTCAGGTTCC TGCCGGCCAC AGGCGTTATC
GCGATGGCGT TGCTGTGCAT GGTGCTGACC GTGATCAGTT ACGAGATGAC GACCTCCAGA
GGCAGTGAGG CGTCCGGGCT GATCAATTGC ATCATCAGCC TGGCGGCCAT TGCCATGACC
ACCTGGCTGG CACTGCGCAT GGCGCTGGCC ATCCGTTCGG TACACGAAGC GCGCTCGCAG
CTGGCGCGGA TCGCACGGGT CAATCAACTG GGTGAACTGA CGGCGTCCAT TGCTCATGAG
GTCAATCAGC CGCTGTCGGC CATTGTCACC AGCGGCAATG CCTGTCAGCG CTGGTTGGCC
ACCGAGCCGG TCAATCTGGA CAAGGCCCGC CAGGCGGTCG AGCGCATGAT CAGTGACGCG
AATCGCGCCG GGGACATCAT CGTCCGGGTG CGCGCGCTGG CGAAGCGTTC GTCCACTCAC
AAGGAGTGGA TCAGCGTGGC CGATACCGTC GCCGAGATCG TCGCGTTGGC ACACAGCGAG
ATAGAAGGGC AGGGCGTCGC ACTGCTGGTC GACGTGCCGG AGGGCCTGCC GCCGCTGCTG
GCTGATCGGG TGCAGATCCA GCAAGTGTTG CTGAACCTGA TGCTCAATGG CGTGGATGCG
ATGAAAAAGC TCAAGGCGGA ACAGGCGCAA CTGGAGGTTC GGGTGGGCTT GCAAGACGGC
GGCGATATCG GATTTGCGGT GAGCGACAAT GGGATCGGCG TGCTGCCGGA AAACATCCAC
CAGTTGTTCG ACGCGTTCTA CACCACCAAG GAGGAAGGGA TGGGGATTGG CCTGGCGATC
AGTCGTTCGA TCATCGAGGC CCATGGCGGG CGCATCTGGG TCACGCCCAA CCCGTCAATC
GGTGCTACGT TTCACTTCAC CCTGCCTACT GGAAAGATGG AAACCTGA
|
|---|
| Protein sequence | MREPESYGKA AMAVRLIALL MLALVIAVAD TLTDLEIAVG VFQIVVVLLA VRFLPATGVI
AMALLCMVLT VISYEMTTSR GSEASGLINC IISLAAIAMT TWLALRMALA IRSVHEARSQ
LARIARVNQL GELTASIAHE VNQPLSAIVT SGNACQRWLA TEPVNLDKAR QAVERMISDA
NRAGDIIVRV RALAKRSSTH KEWISVADTV AEIVALAHSE IEGQGVALLV DVPEGLPPLL
ADRVQIQQVL LNLMLNGVDA MKKLKAEQAQ LEVRVGLQDG GDIGFAVSDN GIGVLPENIH
QLFDAFYTTK EEGMGIGLAI SRSIIEAHGG RIWVTPNPSI GATFHFTLPT GKMET
|
|---|
| |