| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_5086 |
|---|
| Symbol | |
|---|
| ID | 3370644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 6034121 |
|---|
| End bp | 6035359 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637655461 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_238151 |
|---|
| Protein GI | 66048310 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTTG ACAAGTCCAC GGTGGTGGTG TGGGTCGCCA TCAGCCTGAT TCTGGTCGAG
ACCTTTTCCG GGGCCTTGCG CTTCTACTTC GATCAGGCAG GCCTCAGTCC CCTGCTCTAT
CTGCCCAAAG CCGCCTGCAT CCTGCTGTTT GCGCTTGAAC TGTGCACCTT CAGAGCAGGA
AAGCTGTTCT GGACATTCAT GATCCTGTGG CTGCTTTCCG GGCTGCTGGC CATGCTGCAT
CGCGCCAGCG TGCACAACCT GGCGTTCAGT CTGTTCGCGC TGAGCCCGCT GGTGTTCGGC
CTGGTGTGTG GCCGGCACCT GCTGTATCGC CGCAAGCTGC TGTACCGCGC CATTGCTTTC
TGCCTGCTGG CCTCGCTGCT GGGGATTGCT CTGGACAAGC TCACCTCTGT GCCATGGAAG
GGCTACAGCT ACAGCGTCGG TGAGACGCAG TTGAGCGCCA ATACCTCATG GAGTGCGGAC
GAGGTGGATC GCATTGCCGG TTTCGCCAGG GTGTCCAACG TGCTGTCGAT CATGATCGCC
TTCTACACGC TGTACCTGCT CATGTTCCTG CGCTCGCGTC TGATGATGGT GTTGCTGAGT
GCGGTGGCGC TTTACGCCAT CGTGCTGACC ACCAGCAAAG CGCCAGCCGC GGCCTTCGCC
CTGACCATCG TGCTGCTGTT GTTGCGGCGG ATGAGCTGGA CCTGCAGGAC AGTGTGCACC
GTGGTGGTAG GCATCGGTCT GCTGTTGCCG GCGCTTGGCC TGATCGTGAG TCCTGATGCC
TACGCGGTCA GCAGCGGCGG CTCGCTGGCC TCGCTGTATG ACCGGATGAT CAACACCTGG
CCCGGCCTGA TCAATGCGAT GAGTCGCGAA GGCTGGATGA TCAGCGGCGC AGGCTTCGGC
ATGGTCGGCA GCACGATGGG GCTGTTTCCA GTGGAAGGTG CCGGGGTATT TCTCGGCATG
GACAGCTCCG CCCTGTACCT CTGGGCAATG CTGGGCGTGC TCGGCTTGCT GCTGTATGTG
CTGCAGATTC CGCTGTTGTT CCGCCTGATC GATGATCAGA CCCGTGTCGG CCATATGCTG
CTGGCGATCA GCTTCTGCTG GTGCCTGATC AGCTGGACCA CCGACATGTT CGAGGTCGCT
GTCGCCAACC TGTTCATCGG CCTGGCGATT GGTCATGTGA TTGCCGGCAG AGAACCTTCT
GCGAGCCATG CGCCCGGACT GTCGCCGGCT GCCCGCTGA
|
|---|
| Protein sequence | MSFDKSTVVV WVAISLILVE TFSGALRFYF DQAGLSPLLY LPKAACILLF ALELCTFRAG
KLFWTFMILW LLSGLLAMLH RASVHNLAFS LFALSPLVFG LVCGRHLLYR RKLLYRAIAF
CLLASLLGIA LDKLTSVPWK GYSYSVGETQ LSANTSWSAD EVDRIAGFAR VSNVLSIMIA
FYTLYLLMFL RSRLMMVLLS AVALYAIVLT TSKAPAAAFA LTIVLLLLRR MSWTCRTVCT
VVVGIGLLLP ALGLIVSPDA YAVSSGGSLA SLYDRMINTW PGLINAMSRE GWMISGAGFG
MVGSTMGLFP VEGAGVFLGM DSSALYLWAM LGVLGLLLYV LQIPLLFRLI DDQTRVGHML
LAISFCWCLI SWTTDMFEVA VANLFIGLAI GHVIAGREPS ASHAPGLSPA AR
|
|---|
| |