Gene Psyr_5083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5083 
Symbol 
ID3370641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp6028348 
End bp6029385 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content66% 
IMG OID637655458 
ProductBand 7 protein 
Protein accessionYP_238148 
Protein GI66048307 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTCTGT TCCATCATCA TCACGATCAC GCCGACCACG ATAGCCATGA CAGTCACGGC 
CATGGCGGCC ACGGTCATCA CCACCACCAT CATGGCGCGA GCGGCCCCGC CGCGTTCCCC
TGGCGACGGG CAAGCCTGGC TGCGCTGCTG ATCGCGTTTG CGATTGCGGC AGCGAGCCTG
GTGCAGGTGC GTTCGGGCGA GGCGACCGTT GTCACGCGCT TCGGCAACCC GTCCCGCGTC
CTGCTGGAGC CTGGCCTCAA CTGGCGCTGG CCGGCACCGT TCGAGGCGAC CATCCCGGTG
GATCTGCGCC TGCGTACCAC CTCCAGCGGT CTGCAGGACG TCGGTACCCG CGATGGCTTG
CGCATCATCG TGCAGGCCTA TGTGGCGTGG CAGGTGCAGG GCGATGCCGA CAACGTGCAG
CGTTTCATGC GCGCGGTACA GAACCAGCCC GACGAAGCGG CGCGGCAGAT CCGCACCTTT
GTCGGCTCGG CGCTGGAAAC CACGGCGAGC AGTTTCGACC TCTCCAGCCT GGTGAATACC
GACGCGAGCA AGGTGAATAT CACCGCCTTC GAAAATCAGC TGCGCCAGCA GATCGATCAG
CAACTGCTGG CGACTTACGG GGTGCGTGTC CTGCAGGTTG GCGTTGAACG GCTGACCCTG
CCGTCGGTGA CGCTCAACGC TACGGTGGAC CGCATGCGCG CCGAGCGCGA GACCATCGCC
ACCGAGCGCA CCGCCGTGGG CAAGCGTGAG GCGGCGCAGA TTCGTTCCGC CGCCGAGCGC
GACGCACGGA TTGTCGAAGC CGATGCTACG GTCAAGGCGG CCGATATCGA AGCACAGTCG
CGGGTTGAAG CCGCGCAGAT CTATGGGCGT GCCTATGCGG GCTCGCCGCA GCTCTACAAC
CTGCTGCGCT CGCTGGACAC GCTGGGCACC ATCGTGACGC CGGGCACGCG TCTGATACTG
CGCACCGACG CTGCGCCGTT TCGCGTGCTG GTGGACGGCC CGCCGACGCT GGATGGCAAG
AGCGGAACGC AGCCATGA
 
Protein sequence
MSLFHHHHDH ADHDSHDSHG HGGHGHHHHH HGASGPAAFP WRRASLAALL IAFAIAAASL 
VQVRSGEATV VTRFGNPSRV LLEPGLNWRW PAPFEATIPV DLRLRTTSSG LQDVGTRDGL
RIIVQAYVAW QVQGDADNVQ RFMRAVQNQP DEAARQIRTF VGSALETTAS SFDLSSLVNT
DASKVNITAF ENQLRQQIDQ QLLATYGVRV LQVGVERLTL PSVTLNATVD RMRAERETIA
TERTAVGKRE AAQIRSAAER DARIVEADAT VKAADIEAQS RVEAAQIYGR AYAGSPQLYN
LLRSLDTLGT IVTPGTRLIL RTDAAPFRVL VDGPPTLDGK SGTQP