Gene Psyr_5079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5079 
Symbolcls 
ID3370637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp6022410 
End bp6023849 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content59% 
IMG OID637655454 
Productcardiolipin synthetase 
Protein accessionYP_238144 
Protein GI66048303 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTATC ACGACCCGTA CTTTTTCGGT TACGTCCTGG GTTTCATTCA TTTACTCGGT 
ACAGGTGCCG CCATCCATGC ATTGCTGACG GTGCGGACTT CCCAAGGCGC AATTGCCTGG
GCGATGCCGC TGCTGTTCAT TCCCTATTTC ACCTTGCTGC CTTATCTGGT GTTCGGCCGA
AGCTCATTCG ACGCGTACAT CAAGGCGCGC CGCCAGGCCA ACCAGGAAAT GCGGATCGCG
ATCGGCGACC TCAACTGGCG CCCATGGATG GAAGAAGCTG TGGCTGCGCG TCGATCAGAG
GCGTATGCGG CGCTGCGTGC AATGCCCAAG CTGGGCAACA TGCCGGCGCT GGCCAACAAC
AAGGTCAAGT TGCTGATCAA TGGCGAAGAA ACCTTCGGGG CCATTTTTCA GGCCATCCGT
GAAGCGAAAA AGACCATCCT GGTTCAGTTC TTCATCATTC ATGACGACAA ACTTGGCCGC
GAACTGCAAT CGCTGCTGCT GGAAAAAGCC GCCGAAGGCG TGGCGATCTT TGTACTTTAC
GACCGCATCG GCAGCCACGC TCTGCCAGGT GCCTATATCG ATAAGCTACG CGACGGTGGC
GTGCAGATAA AAGCCTTCGC CACACGCGGC GGCTGGCTCA ATCGCTTTCA GATCAACTTC
CGCAACCACC GCAAGATCGT CGTCGTCGAT GGCCTGAAAG GCTATATAGG CGGTCATAAC
GTGGGTGATG AATACATGGG CCTGAAGCCG CCGCTGGCCC CATGGCGCGA TACTCACGTG
CAAGTCATCG GCCCGGTGGT CGCCTGCTTG CAGGAGTCGT TTGCCGAGGA CTGGTTCTGG
GCCACCCGCG AACTGCCCCC GCTCAGCCTG CCTGATGAAT TTCCCGAAGA CGGTGTGCTT
TGCCAGTTGC TGACCAGTGG CCCGGCTGAT GCTCAGGAAA CCTGCTCGCT GTTCTTCGTT
GAAGCCATCC ATGCTGCCGA AGAGCGCGTG TGGATCACCA GCCCCTACTT CATCCCTGAC
GAAGCCGTCA CTGCTGCGCT GACCCTGGCA GTGTTGCGCG GCGTGGACGT GCGCCTGCTG
CTGCCGTCGC GCCCCGACCA CTACGTGGTG TATGCCGCTT CAAGTCTGTA CGCCTTTGAT
GCTGTGCGTG CCGGAGTGCG GGTATTCCGC TACGAACCGG GCTTCCTGCA TCAGAAGGTC
GTCCTGGTCG ACAACGAGAT TACCGCCATC GGCAGCGCCA ACCTCGACAA CCGCTCGTTC
CGCCTCAACT TCGAATTGAT GCTGCTGACC GTCGACAGCG ACTTTTCCAG CCAGGTGGAA
TCCATGCTCA CCGCCGACTT CAACCTCGCC CGCGAAATCT CCGTACAGGA AAGCCATGAA
ACGCGGCGTC TGCATCAACT GGGTATGCGC GTGGCGCGGC TGATTTCACC GATTCTGTGA
 
Protein sequence
MDYHDPYFFG YVLGFIHLLG TGAAIHALLT VRTSQGAIAW AMPLLFIPYF TLLPYLVFGR 
SSFDAYIKAR RQANQEMRIA IGDLNWRPWM EEAVAARRSE AYAALRAMPK LGNMPALANN
KVKLLINGEE TFGAIFQAIR EAKKTILVQF FIIHDDKLGR ELQSLLLEKA AEGVAIFVLY
DRIGSHALPG AYIDKLRDGG VQIKAFATRG GWLNRFQINF RNHRKIVVVD GLKGYIGGHN
VGDEYMGLKP PLAPWRDTHV QVIGPVVACL QESFAEDWFW ATRELPPLSL PDEFPEDGVL
CQLLTSGPAD AQETCSLFFV EAIHAAEERV WITSPYFIPD EAVTAALTLA VLRGVDVRLL
LPSRPDHYVV YAASSLYAFD AVRAGVRVFR YEPGFLHQKV VLVDNEITAI GSANLDNRSF
RLNFELMLLT VDSDFSSQVE SMLTADFNLA REISVQESHE TRRLHQLGMR VARLISPIL