Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_5079 |
Symbol | cls |
ID | 3370637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 6022410 |
End bp | 6023849 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637655454 |
Product | cardiolipin synthetase |
Protein accession | YP_238144 |
Protein GI | 66048303 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTATC ACGACCCGTA CTTTTTCGGT TACGTCCTGG GTTTCATTCA TTTACTCGGT ACAGGTGCCG CCATCCATGC ATTGCTGACG GTGCGGACTT CCCAAGGCGC AATTGCCTGG GCGATGCCGC TGCTGTTCAT TCCCTATTTC ACCTTGCTGC CTTATCTGGT GTTCGGCCGA AGCTCATTCG ACGCGTACAT CAAGGCGCGC CGCCAGGCCA ACCAGGAAAT GCGGATCGCG ATCGGCGACC TCAACTGGCG CCCATGGATG GAAGAAGCTG TGGCTGCGCG TCGATCAGAG GCGTATGCGG CGCTGCGTGC AATGCCCAAG CTGGGCAACA TGCCGGCGCT GGCCAACAAC AAGGTCAAGT TGCTGATCAA TGGCGAAGAA ACCTTCGGGG CCATTTTTCA GGCCATCCGT GAAGCGAAAA AGACCATCCT GGTTCAGTTC TTCATCATTC ATGACGACAA ACTTGGCCGC GAACTGCAAT CGCTGCTGCT GGAAAAAGCC GCCGAAGGCG TGGCGATCTT TGTACTTTAC GACCGCATCG GCAGCCACGC TCTGCCAGGT GCCTATATCG ATAAGCTACG CGACGGTGGC GTGCAGATAA AAGCCTTCGC CACACGCGGC GGCTGGCTCA ATCGCTTTCA GATCAACTTC CGCAACCACC GCAAGATCGT CGTCGTCGAT GGCCTGAAAG GCTATATAGG CGGTCATAAC GTGGGTGATG AATACATGGG CCTGAAGCCG CCGCTGGCCC CATGGCGCGA TACTCACGTG CAAGTCATCG GCCCGGTGGT CGCCTGCTTG CAGGAGTCGT TTGCCGAGGA CTGGTTCTGG GCCACCCGCG AACTGCCCCC GCTCAGCCTG CCTGATGAAT TTCCCGAAGA CGGTGTGCTT TGCCAGTTGC TGACCAGTGG CCCGGCTGAT GCTCAGGAAA CCTGCTCGCT GTTCTTCGTT GAAGCCATCC ATGCTGCCGA AGAGCGCGTG TGGATCACCA GCCCCTACTT CATCCCTGAC GAAGCCGTCA CTGCTGCGCT GACCCTGGCA GTGTTGCGCG GCGTGGACGT GCGCCTGCTG CTGCCGTCGC GCCCCGACCA CTACGTGGTG TATGCCGCTT CAAGTCTGTA CGCCTTTGAT GCTGTGCGTG CCGGAGTGCG GGTATTCCGC TACGAACCGG GCTTCCTGCA TCAGAAGGTC GTCCTGGTCG ACAACGAGAT TACCGCCATC GGCAGCGCCA ACCTCGACAA CCGCTCGTTC CGCCTCAACT TCGAATTGAT GCTGCTGACC GTCGACAGCG ACTTTTCCAG CCAGGTGGAA TCCATGCTCA CCGCCGACTT CAACCTCGCC CGCGAAATCT CCGTACAGGA AAGCCATGAA ACGCGGCGTC TGCATCAACT GGGTATGCGC GTGGCGCGGC TGATTTCACC GATTCTGTGA
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Protein sequence | MDYHDPYFFG YVLGFIHLLG TGAAIHALLT VRTSQGAIAW AMPLLFIPYF TLLPYLVFGR SSFDAYIKAR RQANQEMRIA IGDLNWRPWM EEAVAARRSE AYAALRAMPK LGNMPALANN KVKLLINGEE TFGAIFQAIR EAKKTILVQF FIIHDDKLGR ELQSLLLEKA AEGVAIFVLY DRIGSHALPG AYIDKLRDGG VQIKAFATRG GWLNRFQINF RNHRKIVVVD GLKGYIGGHN VGDEYMGLKP PLAPWRDTHV QVIGPVVACL QESFAEDWFW ATRELPPLSL PDEFPEDGVL CQLLTSGPAD AQETCSLFFV EAIHAAEERV WITSPYFIPD EAVTAALTLA VLRGVDVRLL LPSRPDHYVV YAASSLYAFD AVRAGVRVFR YEPGFLHQKV VLVDNEITAI GSANLDNRSF RLNFELMLLT VDSDFSSQVE SMLTADFNLA REISVQESHE TRRLHQLGMR VARLISPIL
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