Gene Psyr_5070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5070 
Symbol 
ID3370628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp6014988 
End bp6015854 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content63% 
IMG OID637655445 
Productpyridoxamine kinase 
Protein accessionYP_238135 
Protein GI66048294 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase 
TIGRFAM ID[TIGR00687] pyridoxal kinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTA CGCCTCATTT GCTCGCTATC CAGTCCCATG TGGTATTCGG CCACGCCGGC 
AACAGCGCAG CGGTGTTCCC GATGCAGCGT ATCGGGGTCA ACGTCTGGCC GCTCAACACG
GTCCAGTTCT CCAACCACAC GCAATACAAG CAGTGGACCG GCGAAGTGCT GGCTCCGCAG
CAGATTCCTG CGCTGATCGA CGGGATTGCC GCCATCGGCG AGCTGGGCAA CTGCGATGCG
GTGCTGTCGG GGTATCTGGG CAGTGCGGCG CAGGGCAGGG CGATTCTCAC GGGCGTGGCA
CGCATCAAGG CGGCCAATCC GAAAGCGCTG TACCTGTGCG ACCCGGTGAT GGGCCATCCT
GAAAAAGGCT GCATCGTTGC GCCCGAAGTC AGTGATTTCC TGCTGCAGGA AGCGGCGGCC
ATGGCGGACT TCATGTGCCC CAATCAACTG GAGCTGGACA GCTTCTCGGG TCGTAAGCCC
GAATCACTGC ACGACTGCCT GGCGATGGCG CGTGCCTTGC TGGCGCGTGG CCCCAGGGCG
ATTGTGGTGA AACACCTCGA TTACCCCGGC AAGGCCGCCG ATGGCTTCGA AATGCTGCTG
GTCACCGCCG AGGCGAGCTG GCACCTGCGC CGCCCTTTAC TGGCGTTTCC GCGTCAGCCG
GTCGGCGTGG GTGATCTGAC CTCCGGTTTG TTTCTGTCGC GTGTGCTGCT GGGCGACGAT
CTGGTTGCCG CGTTCGAGTT CGCTGCGGCT GCCGTCCACG AAGTGCTGCT GGAAACCCAG
GCCTGTGGCA GCTACGAGCT GGAACTGGTG CGTGCCCAGG ATCGCATCGC GCATCCGCGG
GTGAAGTTCG AAGCAGTGCG TCTGTAA
 
Protein sequence
MKRTPHLLAI QSHVVFGHAG NSAAVFPMQR IGVNVWPLNT VQFSNHTQYK QWTGEVLAPQ 
QIPALIDGIA AIGELGNCDA VLSGYLGSAA QGRAILTGVA RIKAANPKAL YLCDPVMGHP
EKGCIVAPEV SDFLLQEAAA MADFMCPNQL ELDSFSGRKP ESLHDCLAMA RALLARGPRA
IVVKHLDYPG KAADGFEMLL VTAEASWHLR RPLLAFPRQP VGVGDLTSGL FLSRVLLGDD
LVAAFEFAAA AVHEVLLETQ ACGSYELELV RAQDRIAHPR VKFEAVRL