Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_5069 |
Symbol | |
ID | 3370627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 6014454 |
End bp | 6014939 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637655444 |
Product | thioesterase superfamily protein |
Protein accession | YP_238134 |
Protein GI | 66048293 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCCG GAAACGCCCA GCTGTCGATG ACTGTATTGA TGACCCCGGA CATGGCCAAC TTCTCTGGCA ACGTACACGG CGGCACGCTG CTCAAGTACC TGGACGAAGT GGCCTACGCG TGTGCCAGCC GCTACGCCGG GCGCTATGTG GTGACGCTGT CGGTAGACCA GGTGATTTTC CGTGAGCCGG TGCACGTCGG CGAACTGGTG ACCTTTCTCG CCTCGGTCAA TTACACCGGC AACACGTCCA TGGAGGTGGG CATCAAGGTG GTCACCGAAA ATATCCGCGA GCGCTCGGTA CGCCATTCCA ACAGCTGCTT CTTCACCATG GTTGCCGTGG ACGACAATCG CAAGCCCGCC AGCGTCCCGC CCCTGGAGCC CGAATCGGCC GATGCCAAGC GGCGTTTCAT CCAGGCGCAG CAACGCCGCC AGATTCGTCA GGAACTGGAA AAGCGCTATC AGGACATCAA GGAAGAAGCG TTGTAA
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Protein sequence | MEPGNAQLSM TVLMTPDMAN FSGNVHGGTL LKYLDEVAYA CASRYAGRYV VTLSVDQVIF REPVHVGELV TFLASVNYTG NTSMEVGIKV VTENIRERSV RHSNSCFFTM VAVDDNRKPA SVPPLEPESA DAKRRFIQAQ QRRQIRQELE KRYQDIKEEA L
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