Gene Psyr_5069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5069 
Symbol 
ID3370627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp6014454 
End bp6014939 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content60% 
IMG OID637655444 
Productthioesterase superfamily protein 
Protein accessionYP_238134 
Protein GI66048293 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCG GAAACGCCCA GCTGTCGATG ACTGTATTGA TGACCCCGGA CATGGCCAAC 
TTCTCTGGCA ACGTACACGG CGGCACGCTG CTCAAGTACC TGGACGAAGT GGCCTACGCG
TGTGCCAGCC GCTACGCCGG GCGCTATGTG GTGACGCTGT CGGTAGACCA GGTGATTTTC
CGTGAGCCGG TGCACGTCGG CGAACTGGTG ACCTTTCTCG CCTCGGTCAA TTACACCGGC
AACACGTCCA TGGAGGTGGG CATCAAGGTG GTCACCGAAA ATATCCGCGA GCGCTCGGTA
CGCCATTCCA ACAGCTGCTT CTTCACCATG GTTGCCGTGG ACGACAATCG CAAGCCCGCC
AGCGTCCCGC CCCTGGAGCC CGAATCGGCC GATGCCAAGC GGCGTTTCAT CCAGGCGCAG
CAACGCCGCC AGATTCGTCA GGAACTGGAA AAGCGCTATC AGGACATCAA GGAAGAAGCG
TTGTAA
 
Protein sequence
MEPGNAQLSM TVLMTPDMAN FSGNVHGGTL LKYLDEVAYA CASRYAGRYV VTLSVDQVIF 
REPVHVGELV TFLASVNYTG NTSMEVGIKV VTENIRERSV RHSNSCFFTM VAVDDNRKPA
SVPPLEPESA DAKRRFIQAQ QRRQIRQELE KRYQDIKEEA L