Gene Psyr_5055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5055 
Symbol 
ID3370613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5997334 
End bp5998545 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content67% 
IMG OID637655430 
ProductYeeE/YedE 
Protein accessionYP_238120 
Protein GI66048279 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.212129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.622642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACT CTCTTACTGC AACACCCGGA CGCAAGTTCG GCGCGCCGCT GGCTGCGCTG 
TTCCTGCTGC TGATGGGTGC CCAGTTCCTT CTGCTCAGTG TCGGCACCCG CCAGGTGATG
CTGTGGATCG TCGGCGCGGC GTTGGGCGTA ACGCTGTATC ACGCGGCATT CGGTTTCACC
TCGGCGTGGC GGGTGTTCAT CCGCGAGCGG CGGGGTGCTG GCCTGCGCGC GCAAATGGTC
ATGCTGGCGG TCGCTGTGGT GCTGTTTTTC CCGGCACTCG GTGCGGGCAC GCTGTTCGGC
CAGCCAGTCA CCGGCCTGGT TGCGCCTGCC GGGGTTTCGG TCGTCGTCGG CGCGTTCATT
TTCGGCATCG GCATGCAGCT GGGCGGTGGC TGTGCGTCCG GCACACTGTT CACTGCCGGT
GGTGGCAACG CGCGGATGCT GGTGACGCTG CTGTTTTTCA TCCTCGGCTC ACTGATTGCC
ACCCATCACG TCGACTGGTG GTTTGCCCTG CCTTCGTTCC CGGCGGTGTC GGTGGTCAAG
ACCTTCGGCG TGCTGCCTGC GCTGCTGGTC AATCTGGCGC TGTTCGGCTT GATCGCGCTG
GTGACCGTCA AGCTCGAAAA GCGCCGTCAC GGCCAGCTTG AAGTGCCGCC AGCCACGGAC
CATCGTGGCC TGAGTCGCGT GCTGCGCGGG CCGTGGATTC TGGTCTGGGG CGCTGTCGCG
CTGGCACTGC TCAATTACGC AACGCTGGCG TTGGCCGGTC GCCCGTGGGG CATCACCTCG
GCGTTCGCGC TGTGGGGCGC GAAAGCGGCC AGTGGTCTGG GCGTGGACGT CGGCAGTTGG
GTGTTCTGGC AGAGCGCTGC GAACGCCAAG GCGCTGGCGG CTCCGGTGTG GGAAGACATC
ACCAGTGTGA TGGACATCGG CATCATGCTC GGTGCCTTGC TGGCGGCAGG CCTGGCGGGT
CGTTTTGCGC CCAGCCTCGA CATCCCCACG CGCTCTCTGG TGGCGGCAGT CATCGGTGGC
TTGTTGCTCG GCTACGGCTC GCGCCTGGCC TACGGCTGCA ACATCGGTGC GTACTTCAGC
GGCATTGCCT CCGGCAGCCT GCACGGCTGG CTGTGGCTGG TGGCGGCCTA CGCCGGTAAC
GTGATCGGTG TCCGCCTGCG GCCGGTTTTC TTCACCGGCG AGCGTCCGCA GGTGGCCCTG
AGCGGCTGCT GA
 
Protein sequence
MNNSLTATPG RKFGAPLAAL FLLLMGAQFL LLSVGTRQVM LWIVGAALGV TLYHAAFGFT 
SAWRVFIRER RGAGLRAQMV MLAVAVVLFF PALGAGTLFG QPVTGLVAPA GVSVVVGAFI
FGIGMQLGGG CASGTLFTAG GGNARMLVTL LFFILGSLIA THHVDWWFAL PSFPAVSVVK
TFGVLPALLV NLALFGLIAL VTVKLEKRRH GQLEVPPATD HRGLSRVLRG PWILVWGAVA
LALLNYATLA LAGRPWGITS AFALWGAKAA SGLGVDVGSW VFWQSAANAK ALAAPVWEDI
TSVMDIGIML GALLAAGLAG RFAPSLDIPT RSLVAAVIGG LLLGYGSRLA YGCNIGAYFS
GIASGSLHGW LWLVAAYAGN VIGVRLRPVF FTGERPQVAL SGC