| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_5047 |
|---|
| Symbol | |
|---|
| ID | 3370605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 5988256 |
|---|
| End bp | 5989338 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637655422 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
|---|
| Protein accession | YP_238112 |
|---|
| Protein GI | 66048271 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
|---|
| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.219568 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG GTGTAATCGG TGGCGGCCAG CTGGGCCGCA TGTTGGCATT GGCAGGTACG
CCGCTGGGCA TGAACTTCGC CTTTCTCGAT CCCGCGCCGG ACGCCTGTGC TGCGGCACTT
GGCGAGCATC TGCGTGCCGA TTACGGCGAT CTGGATCATC TGCGTCAGTT GGCGGATGAA
GTCGATCTGG TGACCTTCGA GTTTGAAAGC GTTCCCGCCG AGACCGTGGC GTTTCTGTCA
CAGTTCGTAC CGGTCTATCC GAGCGCCGAG GCGTTGCGCA TTGCGCGTGA TCGCTGGTTC
GAAAAGAGCA TGTTCAAGGA CCTGGACATC CCGACGCCGG CATTCGCCGA TATCCAGTCG
CAGGCCGACC TGGATGCCGC GGTAGCCAGC ATCGGTCTGC CTGCCGTGCT CAAGACCCGC
ACCCTGGGTT ATGACGGCAA GGGCCAGAAG GTCCTGCGTT CGGCGGCCGA TGTGGTCGAC
ACATTCGCCG AGCTGGGCAG CGTGCCCTGC CTGCTGGAGG GCTTCGTGCC GTTCAGCGGT
GAAGTGTCGT TGATTGCCGT GCGTGCGCGT GATGGCGAGA CCCGGTTCTA CCCGCTGGTG
CACAACACGC ATGACAGCGG CATCCTGCGT CTGTCCATCG CCAGCACCGA TCATCCTTTG
CAGTCACTGG CCGAGGACTA CGCCGGCCGC GTTCTGAAGC AGCTGGATTA CGTGGGTGTG
CTGGCATTCG AATTCTTTGA AGTCGACGGT GGCCTGAAAG CCAACGAGAT CGCGCCGCGC
GTCCACAACT CCGGTCACTG GACCACCGAA GGCGCCGAGT GCAGCCAGTT CGAAAACCAC
CTGCGTGCGG TTGCCGGTCT GCCGCTGGGC TCTACGGCCA AGGTCGGTGA AAGCGCCATG
CTCAACTTCA TCGGTGAAGT GCCCGCAGTG GACAAGGTCA TCGCGGTCGA AGACTGCCAC
CTGCATCACT ACGGCAAGGC CTTCAAGGCT GGCCGCAAGG TAGGACACGC CACGGTCCGC
AGCGTAGACC GCGCAACGCT GGATCGTCAG GTGAAGTTGG TAGAGTCGCT GATCAAGGGC
TGA
|
|---|
| Protein sequence | MKIGVIGGGQ LGRMLALAGT PLGMNFAFLD PAPDACAAAL GEHLRADYGD LDHLRQLADE
VDLVTFEFES VPAETVAFLS QFVPVYPSAE ALRIARDRWF EKSMFKDLDI PTPAFADIQS
QADLDAAVAS IGLPAVLKTR TLGYDGKGQK VLRSAADVVD TFAELGSVPC LLEGFVPFSG
EVSLIAVRAR DGETRFYPLV HNTHDSGILR LSIASTDHPL QSLAEDYAGR VLKQLDYVGV
LAFEFFEVDG GLKANEIAPR VHNSGHWTTE GAECSQFENH LRAVAGLPLG STAKVGESAM
LNFIGEVPAV DKVIAVEDCH LHHYGKAFKA GRKVGHATVR SVDRATLDRQ VKLVESLIKG
|
|---|
| |