Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_5043 |
Symbol | |
ID | 3370601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5985619 |
End bp | 5986020 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637655418 |
Product | thioesterase superfamily protein |
Protein accession | YP_238108 |
Protein GI | 66048267 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.10158 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGC TCGAACAAGA AGACCCAACC CCGCAAGGCG ACCTTGCACT GCAAATCACC GCCCTTCCCC GCGAAACCAA TGGCTTTGGC GACATTTTTG GCGGCTGGCT GGTGTCCCAG ATGGACCTGG CAGGCACAGC GATGGCCAGC AAAGTCGCGG GTGGCCGTGT GGCGACCGTC GCCATCGATC GCATGGCGTT TCTTGTCCCG GTCGCAGTCG GCGAACAGCT TTCCTTCTAC ACCCGCACCC TCGAAGTCGG ACGCACCTCG ATCAAGATGA TGGTCGAAGT GTGGAGCGAC GACCCGCTCA CCAGCGAATG GCGCAAGGTC ACCGAGGCTG CGTTCGTGTT CGTGGCCATA GATGCCAGCG GCCGGACGCG CTCGGTTCCT GCGCGACGGT AA
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Protein sequence | MIELEQEDPT PQGDLALQIT ALPRETNGFG DIFGGWLVSQ MDLAGTAMAS KVAGGRVATV AIDRMAFLVP VAVGEQLSFY TRTLEVGRTS IKMMVEVWSD DPLTSEWRKV TEAAFVFVAI DASGRTRSVP ARR
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