| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_5042 |
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| Symbol | |
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| ID | 3370600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5983899 |
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| End bp | 5985188 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637655417 |
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| Product | major facilitator transporter |
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| Protein accession | YP_238107 |
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| Protein GI | 66048266 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.12402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCTG TTCCTCCAAG TTCCACGCAG CCTGCGCGGC CTCTGACTCG CAGCGATTAC
AAAACCCTGT CGCTGTCGGC TCTGGGTGGT GCGCTGGAGT TCTACGACTT CATCATTTTC
GTGTTTTTCG CGGCGGTGGT CGGCAAACTG TTTTTCCCGG TGGACATGCC CGACTGGCTG
CGCATGATGC AGACGTTCGG CATTTTCGCC GCCGGTTATC TGGCGAGGCC TCTGGGCGGC
ATTATCATGG CGCACTTCGG CGATCTGCTG GGGCGCAAGA AAATGTTCAC GCTGAGCATT
TTCATGATGG CGGTGCCGAC CCTGATCATG GGTCTGCTAC CGACCTACGC ACAGATCGGC
ATGTGGGCGC CGATTCTGCT GCTGTTGATG CGCGTCATTC AAGGTGCCGC CATTGGCGGT
GAAGTGCCGG GCGCCTGGGT GTTCGTGTCC GAGCATGTGC CTGCACGTCG TGTCGGCTAT
GCCTGTGGCA CCCTGACCGC CGGCCTGACA GCGGGCATCC TGCTGGGCTC GCTGGTCGCC
ACGGCGATCA ACAGCATCTA CACCCCGGTC GAGGTATCGG ATTACGCATG GCGTATCCCT
TTCCTGCTGG GTGGCGTGTT CGGTCTGATG TCGGTGTATT TGCGCCGCCT GCTGCATGAA
ACGCCGGTCT TTGCCGAGTT GCAACTGCGC AAGGCACTGG CCGAGGAAGT GCCGCTCAAG
GCGGTACTGC GTGATCATCG TGGCGCCGTT GCGCTGTCGA TGCTGATGAC CTGGTTGCTG
TCTGCCGGGA TCATCGTGGT GATCCTGATG ACGCCGACCA TCCTGCAGAC CATTTATGGC
TTTCCGGCTG CTACGGCGCT GAAAGCCAAC AGCCTGGCCA TTGTCTTCCT GAGCGTGGGC
TGCATCGCGG CAGGTGCTCT GGCGGATCGC TTCGGCGCAG GCTGGGTGTT TCTGCTGGGC
AGCGCAGGTC TGCTGATCAG TTCCTGGACG TTCTATCACA TCCTCGGCAG CCATCCGGAA
GTGCTGTTCC CGCTGTATGC GGTGACTGGC CTGTTCGTCG GTACGATCGG CGCAGTTCCC
TACGTCATGG TCAAGGCGTT CCCGCCTGTG GTGCGCTTCT CGGGGCTGTC GTTCTCCTAC
AACCTGGCGT ACGCGATCTT CGGTGGTCTG ACGCCGATGG TCGTGACCTT CATGCTCAAG
AGCAGTCCGA TGGGGCCGGC GTGGTACGTC GCGATCCTCT GCGGCCTGGG CATGGCCATC
GGTGCGTTCT TGCTGAGCCG AAAGCGTTGA
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| Protein sequence | MSSVPPSSTQ PARPLTRSDY KTLSLSALGG ALEFYDFIIF VFFAAVVGKL FFPVDMPDWL
RMMQTFGIFA AGYLARPLGG IIMAHFGDLL GRKKMFTLSI FMMAVPTLIM GLLPTYAQIG
MWAPILLLLM RVIQGAAIGG EVPGAWVFVS EHVPARRVGY ACGTLTAGLT AGILLGSLVA
TAINSIYTPV EVSDYAWRIP FLLGGVFGLM SVYLRRLLHE TPVFAELQLR KALAEEVPLK
AVLRDHRGAV ALSMLMTWLL SAGIIVVILM TPTILQTIYG FPAATALKAN SLAIVFLSVG
CIAAGALADR FGAGWVFLLG SAGLLISSWT FYHILGSHPE VLFPLYAVTG LFVGTIGAVP
YVMVKAFPPV VRFSGLSFSY NLAYAIFGGL TPMVVTFMLK SSPMGPAWYV AILCGLGMAI
GAFLLSRKR
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