| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_5039 |
|---|
| Symbol | |
|---|
| ID | 3370597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 5978619 |
|---|
| End bp | 5980289 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637655414 |
|---|
| Product | binding-protein dependent transport system inner membrane protein |
|---|
| Protein accession | YP_238104 |
|---|
| Protein GI | 66048263 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4985] ABC-type phosphate transport system, auxiliary component |
|---|
| TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.369181 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCGGA ACTCCCTCAG GAACTGGTTC AAAAGTGGCG CCCCCGGCGT CTGGATGAGT
GCGGGTGCCG TATCCATCGC TGTGATCATG ACCATCGGCC TGTTGGCGGT GATCGCCGTG
CGCGGCCTTG GGCATTTCTG GCCCGCCGAT CTGGTGAGCG CGCAGTACGC GGTACCCAAT
CAGGAATCGA GTGTTCTGGT CGGTGAACGG GTCGAGCAGG AGCAGGTACC TCGTGCGCGC
CTGAAAAGCG CGGGCCTGCC GGTGCCTGAT CAGGGGCCGG AGTTCATGAC CCGTGAGCTG
TACAAGGTCG GCAATCGGGA TATCAACCCC AGTGACTTCA ACTGGGTGGT AGGCGAATGG
CTGACCGGGC AGAGCCGGCC TGCAGACCTG ATGACGCTGG AGCGTCGCGA GTGGGGCAAT
TTCTACGGCT ATCTGGTCAA CGTCAAGGAG GGCGGACGCA TCGTGGCCGA AGGCGAGGCG
GCCTGGCCGG TCCTGCAAGA GCGCATCAAA CGCGTCGAAA AGCTGGCTGA CGAACTCTAT
ACCCTGGAAA AGAAAGACAT TGGTGCCATC AATCACAGCA TCGAGCGCCT GCGTCTGCAG
GCCCGCAAGC TGGAGCTCGA TGGCCGGCTG GATGCCGCCG CGCAAGCGGA CATGGCCGCC
GAGCGTGCCG AGCTGGATGC GCGTTACAAG GTGATCGAGG CGCGTCTTGA CGGGCTGCAC
CAGGCCTTTG ATCGCGACAG CCTGACCGCG CGTGATGGCA GCGGCAAAGA GATCGAACTC
AGCCTGGGCA AGGTGGTGCG TGCCTATCAG CCCAATGCGA TGGGCACGGT GACCAAGCTG
AGCTTCTACT TCGAGAAACT GTGGGAATTT CTCAGCGCCG ATCCACGCGA AGCCAACACC
GAAGGCGGTA TCTTCCCGGC GATCTTCGGC ACGGTGATGA TGACCCTGAT CATGGCCGTG
ATCGTCACGC CGTTCGGTGT GCTGGCGGCG GTCTATCTGC GTGAGTACGC GCGTCAGGGG
CCGGTGACCC GGTTGATTCG CATCGCGGTG AACAACCTCG CCGGTGTGCC TGCGATTGTC
TACGGCGTGT TCGGCCTGGG CTTTTTCGTC TATGTACTTG GCGGTTCGGT GGATCGGCTG
TTCTTTCCTG AAGCGCTGCC GGCTCCGACG TTCGGCACGC CTGGCCTGTT ATGGGCCTCG
CTGACCCTGG CACTGCTCGC CGTGCCGGTG GTGATTGTGG CAACCGAAGA AGGGCTGGCG
CGCATTCCGC TGACCTTGCG TGAAGGTTCG CTGGCACTGG GTGCAACCAA GGCCGAGACG
CTGTGGAAGA TTGTGTTGCC GATGGCTAGC CCGGCAATGA TGACCGGGCT GATTCTCGCG
GTGGCGCGTG CCGCCGGGGA AGTTGCGCCC TTGATGCTGG TGGGCGTCGT CAAGCTGGCG
CCGTCACTGC CGCTGGACGG CAACTATCCT TATCTGCACC TCGATCAGAA GATCATGCAC
CTGGGTTTCC ACATTTACGA TGTCGGCTTC CAGAGCCCCA ACGTCGAGGC AGCCCGCCCG
CTGGTCTATG CCACCGCACT GCTGCTGGTA CTGGTCATCG CCTTGCTCAA TCTGTCGGCG
GTGAGCATCC GTAACCATTT GCGGGAAAAG TACAAGGCGC TCGACAATTG A
|
|---|
| Protein sequence | MKRNSLRNWF KSGAPGVWMS AGAVSIAVIM TIGLLAVIAV RGLGHFWPAD LVSAQYAVPN
QESSVLVGER VEQEQVPRAR LKSAGLPVPD QGPEFMTREL YKVGNRDINP SDFNWVVGEW
LTGQSRPADL MTLERREWGN FYGYLVNVKE GGRIVAEGEA AWPVLQERIK RVEKLADELY
TLEKKDIGAI NHSIERLRLQ ARKLELDGRL DAAAQADMAA ERAELDARYK VIEARLDGLH
QAFDRDSLTA RDGSGKEIEL SLGKVVRAYQ PNAMGTVTKL SFYFEKLWEF LSADPREANT
EGGIFPAIFG TVMMTLIMAV IVTPFGVLAA VYLREYARQG PVTRLIRIAV NNLAGVPAIV
YGVFGLGFFV YVLGGSVDRL FFPEALPAPT FGTPGLLWAS LTLALLAVPV VIVATEEGLA
RIPLTLREGS LALGATKAET LWKIVLPMAS PAMMTGLILA VARAAGEVAP LMLVGVVKLA
PSLPLDGNYP YLHLDQKIMH LGFHIYDVGF QSPNVEAARP LVYATALLLV LVIALLNLSA
VSIRNHLREK YKALDN
|
|---|
| |