Gene Psyr_5036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5036 
Symbol 
ID3370594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5975798 
End bp5976682 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content59% 
IMG OID637655411 
Productresponse regulator receiver 
Protein accessionYP_238101 
Protein GI66048260 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.118598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGG TCAGTGTATT GGTGGTGGAT GACGCGACTT TCATTCGCGA CTTGGTCAAG 
AAAGGGCTGC GCAATTATTT TCCCGGGATT CATACCGAGG ACGCGGTCAA TGGTCGCAAG
GCTCAGACGT TGCTGGGCAA AGAGGCGTTC GATCTGATCC TGTGCGACTG GGAAATGCCA
GAAATGTCCG GCCTTGAGCT GTTGACATGG TGCCGCCAGC AAGACAATTA CCTGAGAACC
GTTCCGTTCA TCATGGTGAC CAGCCGTGGT GACAAGGAAA ACGTCGTGCA GGCCATTCAG
GCTGGAGTGA CCGATTTTGT CGGCAAGCCG TTCACCAATG AACAGCTGCT GACCAAGGTC
AAGAAAGCGC TGGCAAAAGT CGGCAAGCTT GACGCTGTCA TGTCCACAGC CCCGGCACGC
ATGAACTCGC CGCTCAATGA CTCGCTGAGT GCATTGACCG GTGGCAAGGC CGAAGTGGTT
CGTAGCGCGC CTGCTGCTGC CGCAGCTCCC AAGCCAGCAC CTGCACCCGC CAGATCGGCA
GAGCCGACGG GTCGCGGACA GGGCCAGTTG CGCCTGCCCA ACGGCATTCA GTCGTGCGTG
ATCAAGGCCC TCACCCTGAA AGACGCCACG CTGGTGATTC GCGTCAGCGA AAACCTGCCG
CAGGTACTCG ACAGCGCGGT GCTGGACCTT GAGCAGGGCG AGAGCAACGA AGTCGCGCGC
CTGAATGGCT ACCTGCACTC GGTTGCCGCG TTCGAGCAGA AGCCCGACAG CGAATGGCTG
CAGGTGTCTT TCCGTTTCGT CGACCAGGAT GCGCAGAAGC TCGACTATCT GTCGCGTCTG
ATTGCCCGCG GTACGGCGCA GAAGCACTTT ATCCCGGGTG CCTGA
 
Protein sequence
MSKVSVLVVD DATFIRDLVK KGLRNYFPGI HTEDAVNGRK AQTLLGKEAF DLILCDWEMP 
EMSGLELLTW CRQQDNYLRT VPFIMVTSRG DKENVVQAIQ AGVTDFVGKP FTNEQLLTKV
KKALAKVGKL DAVMSTAPAR MNSPLNDSLS ALTGGKAEVV RSAPAAAAAP KPAPAPARSA
EPTGRGQGQL RLPNGIQSCV IKALTLKDAT LVIRVSENLP QVLDSAVLDL EQGESNEVAR
LNGYLHSVAA FEQKPDSEWL QVSFRFVDQD AQKLDYLSRL IARGTAQKHF IPGA