| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_5035 |
|---|
| Symbol | |
|---|
| ID | 3370593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 5974705 |
|---|
| End bp | 5975607 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637655410 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_238100 |
|---|
| Protein GI | 66048259 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.112753 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAAC GCCTGCTTAT CCTGTTTGCC CTGACGTTGA CTGTGCAGTC GGCCGGGGCG
GTCACGATTT ATAAATTCAC CGATGCCAAT GGCGTGGTGT CCTTCTCGGA CCGGCCGACG
CCCGGCGCAT CGGTCATGGT GTTTCGGGAC CGCATGGTCG AGCGTATCGA CGGCCAGGTG
CACTTGAGTG TCAGACGTGA AAAGGGCGTA CACAGTCTGT ACGTGCGCAA TGATCTGTAT
GCCCCGGTCG AGGTCGAACT CAAGCTTTCC AGTGTGACCA ACGTGCTGGG GGTCTCTGGC
TCGTCGGCAA CGCTGCGCCG CACGATCGCT GCGCGCAGCA ACCAGCGCGT GGTGGTCTTG
AGCCCCAAGG TGGGCAGCAA GCCGATGAAC TACGCCTCGA TGCTGACTTC AACTCTGGGA
GACCCCAAAG GCTCGGTGCA GGCCTACAAA TACCCGCTGC CGTGGATTGG CGGCCCGTTC
CGCCTGACTC AGGGCCCGAA TGGCAGGTAC AGCCATTACG GCGTCAAGGG GCGCTATGCA
ATGGACATCG CCATGCCGGA GGGAACGCCG ATCATTGCCG CGCGCGGCGG CACGGTGGTG
AAGATCGAAA ACAGCCAGTC AGGGCGGGGC TCGAATGCGT CAGGCAACTT TGTGCGCATC
TTGCACGACG ACGGCACCAT GGGCGTCTAC CTGCACCTGA TGCGCGGCTC GGTGAGTGTC
AGGGAAGGTC AGCGGGTGAG TGTCGGAACA GCGCTGGCAC GGTCGGGCAA CACCGGCAAC
AGCACCGGCC CGCACCTGCA CTTTGTCGTG CAGCGCAACT CGGGCAATGA ACTGGTCTCG
ATCCCCTACG AATTCGCCAC ACCGGTGCAG AGCCTGCCCA ACTTCGCCGT CGGCGGGAAT
TGA
|
|---|
| Protein sequence | MLERLLILFA LTLTVQSAGA VTIYKFTDAN GVVSFSDRPT PGASVMVFRD RMVERIDGQV
HLSVRREKGV HSLYVRNDLY APVEVELKLS SVTNVLGVSG SSATLRRTIA ARSNQRVVVL
SPKVGSKPMN YASMLTSTLG DPKGSVQAYK YPLPWIGGPF RLTQGPNGRY SHYGVKGRYA
MDIAMPEGTP IIAARGGTVV KIENSQSGRG SNASGNFVRI LHDDGTMGVY LHLMRGSVSV
REGQRVSVGT ALARSGNTGN STGPHLHFVV QRNSGNELVS IPYEFATPVQ SLPNFAVGGN
|
|---|
| |