Gene Psyr_5024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5024 
Symbol 
ID3370582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5964171 
End bp5966132 
Gene Length1962 bp 
Protein Length653 aa 
Translation table11 
GC content63% 
IMG OID637655399 
Producthypothetical protein 
Protein accessionYP_238089 
Protein GI66048248 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.551196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCGGC TTCGCGCCTG GCTGCTCGCT GGCGCGCTGT CGCTGGTCGG TACGCATGCC 
TTTGCCAGCC TGAAGCTGGA ACTGCACACC GACGGCCTCG ATGCACCTCA ACAGCAAGCC
AGCCAGGCGC TGCTCGACGA AGCCCTGCAT GCGTTACCGC CCAGCTTCGT CGAAGCACTG
GACCGCACCG TCGAGGTGAG CTGGTCCGCT GACATGCCGC AGAATGCCTA CGGTCAGGCT
GCCGGTCCCT ATCAGCTGTA CCTCAACAAC CACCTGCTGG CGTCATTGAC GGACGGCTCG
GCCGCCACCG CCCAGACGGG CCGACCACAC GGCACGGTGC GTCGTGAGTT GCTCGCCACT
GTCCTGCATG AGCTGACCCA CGTCTACGAC CGCGCCCGCC TGTGGTCGCC CAGCGAGCGA
GCGGCGATTT TTCGCTGCAC ATCACGCAGC AGTTCGCTGG GCAAGGTCGG CCTGCCTGAC
AACTGCCGCG GCCAGACCGA GCGACGCTTC ACCCTGAGTG ACGATCCACG CCTGCTGGAC
CTGGCGGGCT GGCAGCAATA TGTCGGACGT CGTGGCGACC GCGAGGAACA TAACGGCCAG
GTTGCCCGCA GCCCGGACAT CTACGAAACC ACCAGCCCGC TGGAATTCGT GGCGGTGAAC
ATGGAGTATT TCCTCCTTGA TCCGGCCTAC GCCTGCCGTC GCCCTGCCCT GTATGCGTAT
TACAAGGAGC GTTTCGGCTG GGCACCTGCA GCCCATAACG AATGCCCAAA GTTTTACCCC
TACCTGAACG CCGGCAGCGA CTTCGGCCGG GAGCCGCTGG GCAAGCTGGA CCCGGAACGG
GTCTATGCGG TGGACTATCT GCTGGCCGAG GCGAACCAGA ACTGGGCAAG CCGCTGGGGC
CACAGCATGT TGCGCCTGGT GATCTGCAAA CCCGGTCGCC CGCGCGGCCC GGATTGCCGA
CTGGACCTCG ATCAGCATCT GGTGCTGTCT TACCGGGCGT TTGTCGGCGA CGTGCAGCTG
TCCAGCTGGG ACGGCCTGAT GGGGGCCTAC CCGTCGCGCC TGTTCGTCCT GCCACTGGCG
CAGGTCATCG ATGAATACAC CAAGACCGAA CTGCGCAGCC TGGCGTCGGT ACCGATCAAG
CTGTCGCGTC CGGAAATAGA AGGGCTGGTG CAGCACGCTG CCGAGATGCA CTGGAGCTAC
GACGGCAACT ACTACTTCCT TTCGAACAAC TGCGCCGTTG AAAACCTCAA ACTGCTGCGC
GCCGGTACGC ACAACCCCAA ACTCGTCGGC CTGGACAGCA TTTTGCCCAA CGGTTTGCTT
GAAGTCCTCG AAGGCCGTGG GCTGGCTGAC ACCAGCGTAC TGGATGATCC CAAGGAGGCG
CTGCGTCTGG GCTATCGGTT CGACTCCTAT CGCGACCGCT ATCAGGCGAT GTTCGAAGTG
CTGAAGAAGC ACCTGCCGAT CAAACAGAAC ACCGTGGAAG ACTGGATGGC CCTGCCAGCC
AGTGAGCGCA GCCAGTGGTT CGCTAAAGCC GATCTACGTA CCAGCGCTGC GATTCTGCTG
CTCGAGCAGG CCAGCCTGCG CAGGCAACTG CTGTTGGCCC AGGACGAAGT GAAACAGAGC
TACCTGGGTG CACGGGAATT GAAAGACGGC AAAGTCTCCA ACGCGACCAA AACGCTGCAG
GAAATCCTCG CCAGCAGCGG GTTCCTCAGC CGGCCTGCCG AGCTGCTGGG CAGCGACGGG
TACGGTTTGC CACAGGCGGG TGAATGGCAG CGTCTTGAGG CAGAAAGCAG TCAGCGCCAG
AAGCAGCTCA AGCGCCTGAC CGGCGATCTC GACAAGGAAG TGCGAGCCCT GCTGGAGCCT
GAGCGCGCCA AAGAGATTGC CGCCAACGAA GCCAACCTCA AACAGGTGTC CGAGCACCTC
AGGGCGTTGC ACAAGGCTGC AGGCGGGCTG CAGCTGCCGT GA
 
Protein sequence
MRRLRAWLLA GALSLVGTHA FASLKLELHT DGLDAPQQQA SQALLDEALH ALPPSFVEAL 
DRTVEVSWSA DMPQNAYGQA AGPYQLYLNN HLLASLTDGS AATAQTGRPH GTVRRELLAT
VLHELTHVYD RARLWSPSER AAIFRCTSRS SSLGKVGLPD NCRGQTERRF TLSDDPRLLD
LAGWQQYVGR RGDREEHNGQ VARSPDIYET TSPLEFVAVN MEYFLLDPAY ACRRPALYAY
YKERFGWAPA AHNECPKFYP YLNAGSDFGR EPLGKLDPER VYAVDYLLAE ANQNWASRWG
HSMLRLVICK PGRPRGPDCR LDLDQHLVLS YRAFVGDVQL SSWDGLMGAY PSRLFVLPLA
QVIDEYTKTE LRSLASVPIK LSRPEIEGLV QHAAEMHWSY DGNYYFLSNN CAVENLKLLR
AGTHNPKLVG LDSILPNGLL EVLEGRGLAD TSVLDDPKEA LRLGYRFDSY RDRYQAMFEV
LKKHLPIKQN TVEDWMALPA SERSQWFAKA DLRTSAAILL LEQASLRRQL LLAQDEVKQS
YLGARELKDG KVSNATKTLQ EILASSGFLS RPAELLGSDG YGLPQAGEWQ RLEAESSQRQ
KQLKRLTGDL DKEVRALLEP ERAKEIAANE ANLKQVSEHL RALHKAAGGL QLP