Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_5024 |
Symbol | |
ID | 3370582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5964171 |
End bp | 5966132 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637655399 |
Product | hypothetical protein |
Protein accession | YP_238089 |
Protein GI | 66048248 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.551196 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGCGGC TTCGCGCCTG GCTGCTCGCT GGCGCGCTGT CGCTGGTCGG TACGCATGCC TTTGCCAGCC TGAAGCTGGA ACTGCACACC GACGGCCTCG ATGCACCTCA ACAGCAAGCC AGCCAGGCGC TGCTCGACGA AGCCCTGCAT GCGTTACCGC CCAGCTTCGT CGAAGCACTG GACCGCACCG TCGAGGTGAG CTGGTCCGCT GACATGCCGC AGAATGCCTA CGGTCAGGCT GCCGGTCCCT ATCAGCTGTA CCTCAACAAC CACCTGCTGG CGTCATTGAC GGACGGCTCG GCCGCCACCG CCCAGACGGG CCGACCACAC GGCACGGTGC GTCGTGAGTT GCTCGCCACT GTCCTGCATG AGCTGACCCA CGTCTACGAC CGCGCCCGCC TGTGGTCGCC CAGCGAGCGA GCGGCGATTT TTCGCTGCAC ATCACGCAGC AGTTCGCTGG GCAAGGTCGG CCTGCCTGAC AACTGCCGCG GCCAGACCGA GCGACGCTTC ACCCTGAGTG ACGATCCACG CCTGCTGGAC CTGGCGGGCT GGCAGCAATA TGTCGGACGT CGTGGCGACC GCGAGGAACA TAACGGCCAG GTTGCCCGCA GCCCGGACAT CTACGAAACC ACCAGCCCGC TGGAATTCGT GGCGGTGAAC ATGGAGTATT TCCTCCTTGA TCCGGCCTAC GCCTGCCGTC GCCCTGCCCT GTATGCGTAT TACAAGGAGC GTTTCGGCTG GGCACCTGCA GCCCATAACG AATGCCCAAA GTTTTACCCC TACCTGAACG CCGGCAGCGA CTTCGGCCGG GAGCCGCTGG GCAAGCTGGA CCCGGAACGG GTCTATGCGG TGGACTATCT GCTGGCCGAG GCGAACCAGA ACTGGGCAAG CCGCTGGGGC CACAGCATGT TGCGCCTGGT GATCTGCAAA CCCGGTCGCC CGCGCGGCCC GGATTGCCGA CTGGACCTCG ATCAGCATCT GGTGCTGTCT TACCGGGCGT TTGTCGGCGA CGTGCAGCTG TCCAGCTGGG ACGGCCTGAT GGGGGCCTAC CCGTCGCGCC TGTTCGTCCT GCCACTGGCG CAGGTCATCG ATGAATACAC CAAGACCGAA CTGCGCAGCC TGGCGTCGGT ACCGATCAAG CTGTCGCGTC CGGAAATAGA AGGGCTGGTG CAGCACGCTG CCGAGATGCA CTGGAGCTAC GACGGCAACT ACTACTTCCT TTCGAACAAC TGCGCCGTTG AAAACCTCAA ACTGCTGCGC GCCGGTACGC ACAACCCCAA ACTCGTCGGC CTGGACAGCA TTTTGCCCAA CGGTTTGCTT GAAGTCCTCG AAGGCCGTGG GCTGGCTGAC ACCAGCGTAC TGGATGATCC CAAGGAGGCG CTGCGTCTGG GCTATCGGTT CGACTCCTAT CGCGACCGCT ATCAGGCGAT GTTCGAAGTG CTGAAGAAGC ACCTGCCGAT CAAACAGAAC ACCGTGGAAG ACTGGATGGC CCTGCCAGCC AGTGAGCGCA GCCAGTGGTT CGCTAAAGCC GATCTACGTA CCAGCGCTGC GATTCTGCTG CTCGAGCAGG CCAGCCTGCG CAGGCAACTG CTGTTGGCCC AGGACGAAGT GAAACAGAGC TACCTGGGTG CACGGGAATT GAAAGACGGC AAAGTCTCCA ACGCGACCAA AACGCTGCAG GAAATCCTCG CCAGCAGCGG GTTCCTCAGC CGGCCTGCCG AGCTGCTGGG CAGCGACGGG TACGGTTTGC CACAGGCGGG TGAATGGCAG CGTCTTGAGG CAGAAAGCAG TCAGCGCCAG AAGCAGCTCA AGCGCCTGAC CGGCGATCTC GACAAGGAAG TGCGAGCCCT GCTGGAGCCT GAGCGCGCCA AAGAGATTGC CGCCAACGAA GCCAACCTCA AACAGGTGTC CGAGCACCTC AGGGCGTTGC ACAAGGCTGC AGGCGGGCTG CAGCTGCCGT GA
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Protein sequence | MRRLRAWLLA GALSLVGTHA FASLKLELHT DGLDAPQQQA SQALLDEALH ALPPSFVEAL DRTVEVSWSA DMPQNAYGQA AGPYQLYLNN HLLASLTDGS AATAQTGRPH GTVRRELLAT VLHELTHVYD RARLWSPSER AAIFRCTSRS SSLGKVGLPD NCRGQTERRF TLSDDPRLLD LAGWQQYVGR RGDREEHNGQ VARSPDIYET TSPLEFVAVN MEYFLLDPAY ACRRPALYAY YKERFGWAPA AHNECPKFYP YLNAGSDFGR EPLGKLDPER VYAVDYLLAE ANQNWASRWG HSMLRLVICK PGRPRGPDCR LDLDQHLVLS YRAFVGDVQL SSWDGLMGAY PSRLFVLPLA QVIDEYTKTE LRSLASVPIK LSRPEIEGLV QHAAEMHWSY DGNYYFLSNN CAVENLKLLR AGTHNPKLVG LDSILPNGLL EVLEGRGLAD TSVLDDPKEA LRLGYRFDSY RDRYQAMFEV LKKHLPIKQN TVEDWMALPA SERSQWFAKA DLRTSAAILL LEQASLRRQL LLAQDEVKQS YLGARELKDG KVSNATKTLQ EILASSGFLS RPAELLGSDG YGLPQAGEWQ RLEAESSQRQ KQLKRLTGDL DKEVRALLEP ERAKEIAANE ANLKQVSEHL RALHKAAGGL QLP
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