Gene Psyr_5019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5019 
Symbol 
ID3370577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5960765 
End bp5962258 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content61% 
IMG OID637655394 
ProductAcetyl-CoA hydrolase 
Protein accessionYP_238084 
Protein GI66048243 
COG category[C] Energy production and conversion 
COG ID[COG0427] Acetyl-CoA hydrolase 
TIGRFAM ID[TIGR03458] succinate CoA transferases 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.49195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGTG ACCGTATCCG CCGGCCCTCC CTGATGAGCA AGGTTATGAG CGCAGCCGAC 
GCTGCCGCCT TGATTGAAGA CGGCATGACC GTCGGCATGA GTGGCTTCAC CCGTGCAGGC
GAAGCCAAGG CCGTACCCCA CGCGCTGGCC GAGCGCGCCA AAGTGACGCC GCTGAAAATC
AGTCTGATGA CCGGCGCCAG TCTGGGCAAT GACCTGGACA AGCAACTGAC CGAGTCCGGC
GTTCTGTCCC GGCGCATGCC CTTTCAGGTC GACAGCACGC TGCGCAAGGC GATCAACAAC
GGCACGGTGA TGTTCATCGA TCAGCATTTG TCCGACACCG TCGAGCTGCT GCGCAATCGG
CAGATCAAGG CTGTGGACCT GGCCGTGATC GAATGCGTGG CGATCACCGA AGAGGGTCAT
CTGGTGCTGA GTACCTCCGT GGGCAACTCG GCCAGCTTCG CCATTCTGGC CAAACAGGTC
ATCGTGGAAA TCAACCTGTC CCAGCCACTT GAGCTGGAAG GCCTGCACGA CATCTATATA
CCCAGCTACA GACCGACACG CCTGCCGATT CCGGTCCTGG AGGCCGATTC GCGTATCGGC
AGCCACGCGG TGAAGATCGA CCCGGCAAAA ATAGTCGGCA TTGTCATCAG CAACCAGCCT
GACTCGCCCT CCACGGTCAC ACCACCTGAT GCGGACACGC AGGCCATCGC CAATCATCTG
GTGGAGTTCT TCAAGAAAGA AGTGCGCGAA GACCGGCTGA CCGACAAGCT GATGCCACTG
CAGGCCGGGA TCGGCAACAT TGCCAACGCC GTGATGCACG GCCTGCTGGC GTCGCCCTTC
ACGGACCTGA CGATGTACTC CGAGGTGCTG CAGGACTCGA CCTTCGACCT GTTCGATGCA
GGCAAACTGA CTTTCGCCTC GGGCAGCTCC ATGACCTTGT CGGCGGCCAA GCACGCCGAG
GTCTTTGCCG ACTTCAATCG TTACAAGTCC AGGCTGGTGT TGCGCCCCCA GGAAATCTCC
AACCACCCCG AGGTGATCCG CCGTCTGGGC ATCATCGGGA TCAATACCGC GCTGGAGTTC
GACCTGTACG GCAATGTGAA CTCCACCCAC ATCTGCGGGA CACGCATGAT GAACGGCATC
GGCGGTTCCG GAGACTTCTC GCGCAACGCG CACCTGGCGA TCTTCGTCAC CAAATCGATC
GCCAAAGGTG GCGCGATATC CAGCGTCGTG CCCATGGTCA GCCATGTCGA CCACACCGAA
CACGACGTCG ACATCCTGGT CACCGAGCAG GGCCTGGCGG ATCTGCGCGG CCTGGCGCCT
CGCGAGCGCG CCAGGGTGAT CATCGACAAC TGCGTGCATC CGGATTATCG CGACGCGCTG
AACGCCTATT TAAGTGCTGC TTGCGCTGTG GGCGGGCACA CCCCGCACAT CCTGCGCGAA
GCACTGAGTT GGCACATCAA CCTGGAAGAA ACCGGGCGCA TGTTGCCAGC CTGA
 
Protein sequence
MYRDRIRRPS LMSKVMSAAD AAALIEDGMT VGMSGFTRAG EAKAVPHALA ERAKVTPLKI 
SLMTGASLGN DLDKQLTESG VLSRRMPFQV DSTLRKAINN GTVMFIDQHL SDTVELLRNR
QIKAVDLAVI ECVAITEEGH LVLSTSVGNS ASFAILAKQV IVEINLSQPL ELEGLHDIYI
PSYRPTRLPI PVLEADSRIG SHAVKIDPAK IVGIVISNQP DSPSTVTPPD ADTQAIANHL
VEFFKKEVRE DRLTDKLMPL QAGIGNIANA VMHGLLASPF TDLTMYSEVL QDSTFDLFDA
GKLTFASGSS MTLSAAKHAE VFADFNRYKS RLVLRPQEIS NHPEVIRRLG IIGINTALEF
DLYGNVNSTH ICGTRMMNGI GGSGDFSRNA HLAIFVTKSI AKGGAISSVV PMVSHVDHTE
HDVDILVTEQ GLADLRGLAP RERARVIIDN CVHPDYRDAL NAYLSAACAV GGHTPHILRE
ALSWHINLEE TGRMLPA