Gene Psyr_5016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5016 
Symbol 
ID3370574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5957679 
End bp5958800 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content63% 
IMG OID637655391 
Productalanine dehydrogenase/PNT 
Protein accessionYP_238081 
Protein GI66048240 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID[TIGR00561] NAD(P) transhydrogenase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.803102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.173751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACATTG GTGTTCCTCT CGAAACACAA GCGGGCGAAA CCCGGGTATC TGCTACCCCG 
GAAACCATCA AAAAGCTGAT CAGCCAGGGT CACAGGGTTA CGGTGCAAAG CGGGGCGGGC
ATTCATGCCA GCGTTCCGGA CAGTGCCTAC GAGGCTGCTG GCGCAGTGAT CGGTGACAGC
AACGAGACCT ATGCGGCCGA ACTGATTCTC AAGGTCGTCG CACCTGACGA TGAGGCGCTG
AGCCTGATCA AAAGTGGCTC GGTGGTCGTC GGCATGCTCA ACCCCTTCAA CGATGAACTG
ATCGGCAAAA TGGCCGCACG CGGCATTACC GCGTTCGCCC TGGAAGCCGC GCCGCGCACA
TCGCGCGCGC AAAGCCTTGA CGTGCTGTCT TCGCAAGCCA ACATCGCGGG CTACAAGGCA
GTGCTGCTCG CCGCACATCA TTACCCGCGC TTCATGCCCA TGCTGATGAC CGCTGCCGGC
ACCGTCAAAG CTGCCCGGGT GCTGATCCTG GGCGCAGGCG TTGCTGGTCT GCAGGCCATT
GCCACCGCCA AAAGGCTGGG CGCCGTGGTA GAAGCCTCGG ATGTGCGTCC GGCAGTAAAG
GAACAGATCG AGTCGCTGGG CGCAAAATTC ATCGATGTGC CCTACGAGAC CGACGAAGAG
CGCGAATGCG CCGAAGGCGT CGGCGGCTAC GCGCGGCCCA TGCCGGCCAG CTGGATGCAG
CGCCAGGCCG CCGCTGTGCA TGAGCGCGCG AAACTGTCGG ACATCGTCAT CACGACCGCA
CTCATTCCCG GCCGCAAGGC ACCGGTGCTG CTCGGCGCAG AAACCGTGGC GCAGATGAAA
CCAGGCTCGG TGGTGATCGA CCTGGCCGCT GCACAGGGCG GCAACTGCCC GCTGACCGTT
GCCGATCAAG TGGTTGTCGA GCACGGCGTG ACCATCGTCG GCCACACCAA CCTGCCCGCT
CTGGTCGCAG CCGATGCATC GGCGCTCTAC GCCCGCAACC TGCTGGACTT CATGAAGCTG
CTGTTCGACA AGGACGGCAC ATTCTCGATC AACCTCGAAG ACGACATCGT CGCCGCATGC
CTGATGTGCC GCGACGGGCA AGTTGTCCGC AAGAACGGCT GA
 
Protein sequence
MHIGVPLETQ AGETRVSATP ETIKKLISQG HRVTVQSGAG IHASVPDSAY EAAGAVIGDS 
NETYAAELIL KVVAPDDEAL SLIKSGSVVV GMLNPFNDEL IGKMAARGIT AFALEAAPRT
SRAQSLDVLS SQANIAGYKA VLLAAHHYPR FMPMLMTAAG TVKAARVLIL GAGVAGLQAI
ATAKRLGAVV EASDVRPAVK EQIESLGAKF IDVPYETDEE RECAEGVGGY ARPMPASWMQ
RQAAAVHERA KLSDIVITTA LIPGRKAPVL LGAETVAQMK PGSVVIDLAA AQGGNCPLTV
ADQVVVEHGV TIVGHTNLPA LVAADASALY ARNLLDFMKL LFDKDGTFSI NLEDDIVAAC
LMCRDGQVVR KNG