Gene Psyr_5015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5015 
Symbol 
ID3370573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5956273 
End bp5957259 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content61% 
IMG OID637655390 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_238080 
Protein GI66048239 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.46519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.168867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGCTA ATTTCTCACT CCGTGATACC AAAATTCGCT CTAAAACAAA AATATCAGTG 
AGAAGAAAGT ACATGAGACG CAAGATACCC AGCACCACTG CACTGGTCAG TTTCGAGGCA
GCCGCCCGCC ACGAGAGCTT CACCAAGGCC GCCAATGAGC TGTCCCTCAC GCAAGGCGCT
GTGTGTCGGC AAATCGGCGG ACTGGAGGAG TTTCTCGGCG TTGAGCTGTT CCGGCGTTCG
CGCAGGGGCG TAAAGCTCAC GGAAGCGGGG CTGTCCTATA GTCGTCGTGT GTCCCAGCAA
CTGGACGCGG TCGAGCGTGA CACACTGTCG GTCATGGGCC AGCAAGGTGC CAACGCCATC
GAGCTCGCCG TGGTGCCGAC CTTCGGAACT CAGTGGCTGC TGCCGCGCCT GAAGGACTTC
CAGCACAAGC ACCCCGACGT CACGGTCCAC CTGACCAACC GCACCCGCCC GTTCCTGTTT
GCCGACACCG ACTTCGATGC CGCGATCTAC TTTGGCGATG CCGATTGGTC CGGCACCCAG
TCGCATCGGC TGATGGGCGA AAACTCCATG CCGGTCTGCA GCCCCTCCTT TCTTGAAGGT
CGCGACAGCC TGGGAGCACG CGAACTGGCC GAATTGCCAC TGCTGCAACA GACCACCCGG
CCCTACGCCT GGCGGCAATG GTTCCACGCA CAGGATCTGG ATGTAGCGCG CGACATGACC
GGCCCGCGCT ACGAGCTGTT CTCCATGCTG GCGCAGGCGG CCATGCACGA CATGGGCATC
GCCCTGATTC CGCCCTTCCT CATTCAGCGT GAACTGCAGG AAAGGCGCCT GGTGATCGCA
AACACCCGCG CACTGCCCGG CAGTAGCAGT AAGGCCTATT ACCTGATGAT TCCCGAGCGC
AAAGTGGAAT CGGCCTCGCT GACTGCATTT CGTGACTGGC TGATCGAACA GGCCCAGCGT
TACCGGCTGC CCCAGGAACA AGCCTGA
 
Protein sequence
MCANFSLRDT KIRSKTKISV RRKYMRRKIP STTALVSFEA AARHESFTKA ANELSLTQGA 
VCRQIGGLEE FLGVELFRRS RRGVKLTEAG LSYSRRVSQQ LDAVERDTLS VMGQQGANAI
ELAVVPTFGT QWLLPRLKDF QHKHPDVTVH LTNRTRPFLF ADTDFDAAIY FGDADWSGTQ
SHRLMGENSM PVCSPSFLEG RDSLGARELA ELPLLQQTTR PYAWRQWFHA QDLDVARDMT
GPRYELFSML AQAAMHDMGI ALIPPFLIQR ELQERRLVIA NTRALPGSSS KAYYLMIPER
KVESASLTAF RDWLIEQAQR YRLPQEQA