Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_5015 |
Symbol | |
ID | 3370573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5956273 |
End bp | 5957259 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637655390 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_238080 |
Protein GI | 66048239 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.46519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.168867 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTGCTA ATTTCTCACT CCGTGATACC AAAATTCGCT CTAAAACAAA AATATCAGTG AGAAGAAAGT ACATGAGACG CAAGATACCC AGCACCACTG CACTGGTCAG TTTCGAGGCA GCCGCCCGCC ACGAGAGCTT CACCAAGGCC GCCAATGAGC TGTCCCTCAC GCAAGGCGCT GTGTGTCGGC AAATCGGCGG ACTGGAGGAG TTTCTCGGCG TTGAGCTGTT CCGGCGTTCG CGCAGGGGCG TAAAGCTCAC GGAAGCGGGG CTGTCCTATA GTCGTCGTGT GTCCCAGCAA CTGGACGCGG TCGAGCGTGA CACACTGTCG GTCATGGGCC AGCAAGGTGC CAACGCCATC GAGCTCGCCG TGGTGCCGAC CTTCGGAACT CAGTGGCTGC TGCCGCGCCT GAAGGACTTC CAGCACAAGC ACCCCGACGT CACGGTCCAC CTGACCAACC GCACCCGCCC GTTCCTGTTT GCCGACACCG ACTTCGATGC CGCGATCTAC TTTGGCGATG CCGATTGGTC CGGCACCCAG TCGCATCGGC TGATGGGCGA AAACTCCATG CCGGTCTGCA GCCCCTCCTT TCTTGAAGGT CGCGACAGCC TGGGAGCACG CGAACTGGCC GAATTGCCAC TGCTGCAACA GACCACCCGG CCCTACGCCT GGCGGCAATG GTTCCACGCA CAGGATCTGG ATGTAGCGCG CGACATGACC GGCCCGCGCT ACGAGCTGTT CTCCATGCTG GCGCAGGCGG CCATGCACGA CATGGGCATC GCCCTGATTC CGCCCTTCCT CATTCAGCGT GAACTGCAGG AAAGGCGCCT GGTGATCGCA AACACCCGCG CACTGCCCGG CAGTAGCAGT AAGGCCTATT ACCTGATGAT TCCCGAGCGC AAAGTGGAAT CGGCCTCGCT GACTGCATTT CGTGACTGGC TGATCGAACA GGCCCAGCGT TACCGGCTGC CCCAGGAACA AGCCTGA
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Protein sequence | MCANFSLRDT KIRSKTKISV RRKYMRRKIP STTALVSFEA AARHESFTKA ANELSLTQGA VCRQIGGLEE FLGVELFRRS RRGVKLTEAG LSYSRRVSQQ LDAVERDTLS VMGQQGANAI ELAVVPTFGT QWLLPRLKDF QHKHPDVTVH LTNRTRPFLF ADTDFDAAIY FGDADWSGTQ SHRLMGENSM PVCSPSFLEG RDSLGARELA ELPLLQQTTR PYAWRQWFHA QDLDVARDMT GPRYELFSML AQAAMHDMGI ALIPPFLIQR ELQERRLVIA NTRALPGSSS KAYYLMIPER KVESASLTAF RDWLIEQAQR YRLPQEQA
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