Gene Psyr_5011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5011 
Symbol 
ID3370563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5943655 
End bp5947101 
Gene Length3447 bp 
Protein Length1148 aa 
Translation table11 
GC content60% 
IMG OID637655380 
Productamino acid adenylation:thioester reductase 
Protein accessionYP_238076 
Protein GI66048235 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1020] Non-ribosomal peptide synthetase modules and related proteins
[COG3320] Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes 
TIGRFAM ID[TIGR01733] amino acid adenylation domain
[TIGR01746] thioester reductase domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.116457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCC TGGAGATTGT GCTCATCGGT CACAGCCTGA CCTTGAGTGA ACTGAATAGC 
GAGCTGCTGG ACCACGGGCA TGGCGTGCGG CATCTGTCTG ATCAGCAGGC GCTGGACGCG
TTGACGGTGC CTGATGGCGG CGTGCTGATC GAAGACGGCA GCCTGGACCT GTCCGAGGAA
CAACTGAATG CGTTCGGCCA CTGCACGCAA CTGCGACTGC GGGTCGGTTT CAGCAAGGCG
CTGGATCACG GATTACCCCG GCTGGAATTG CTGTGCTGGC ATGGCGCAGC CGAGGCTCGA
CGTTTGATCG TTCATAAGTG GCTTGCGGTC GAGGAATCAG GCAACGGGCG GGTACTGCGT
GATGCCGCTG TCGCAGCCAT GGTGGATCTG GCGACATTGC AGATCAGCCG GTTATCCAGA
GATGAAGACT GTCTCAACGG TATGACAAGC GTCACACCCG CCCGGAGCGA TCGGCAGCAC
GGCTTGCAGG CGGTTGATCA ATTGCTGTTC GAGCATCGTT TCAATCAGAC AGATCAACCG
CATCTGCTGA AACTGTCCGA AACACCCATC ACCGAGCGGC TGGAGCAGGC GCTGCTGACG
TTTGCCGAAC GCCCGGCACT GTCCGTTCGC AACCGGACGC TCAGCTATCG GCAACTGCAC
GCGCACAGTC TCGCCATCCA AAGCTTGCTG CAGCCGTTGC TGGCGCACGC GAAAGCCGGC
ACACCTGCCG TGATCGGTAT CTGCCTGCAC AAGTCAGCCG AGCTGTATGC GGGCATTCTC
GCGGTTCTGG GTTGCGGTGC GGTTTACCTG CCACTTGATC CCGGCCAGCC CGTGCAGCGT
CAGCAGTACA TTCTGGAAAA CTCGGGAGCG ATGCTGTTGC TGCACGATGG CTCGCACCCG
CTGGCGGCTG CGGAGTTTCC GGCGCTGGAT ATCGCTACGG TTCCTGTGGG AGATGGAGCT
CCAACCCATG TACGCGTTGC TACCGATCAG GATGCGCCCT GCATGGCGCT GTACACGTCG
GGCACCACGG GACAGCCGAA AGGCGTATTG CTCAGCCAGC GCAATCTCAG CCACTTCACC
GCCTGGTATG CCGAGCATGT GAGCCTGAGT GAACACAGCC GGGTGCTGCA ATTCTCTACG
CTGAGTTTCG ACTCATCGAT TATCGACATT TTCCCCACCT GGCTCAGTGG CGCCGAGCTG
GTGGTCCCCG ATGAAGACCA GCGACGTGAT CCGTTGCAGT TGGTCAGCGC GCTGCAACAA
GGCATCACCC ATGCATTCCT GCCGCCGGCG CTGTTGAGCA TCCTGCCGCT GGATCAACCG
CTGGGGCTTG AGCATGTCAT GACCGGAGGC GACGTCTGTG AGCCGCACGT GATTGCGCAA
CTCACCAGGC AATGTCATTT CCACAACCTG TACGGCCCCA CCGAGGCCAC GGTGTTGGTC
ACCGCCTGCG AGTTCGGGCC GTCCAGCAGC AACCGACATC TGGGCCGACC GATCGCCAAC
AGCCAGGCGT GGATTCTGGA CGAGCAATTG CAGCCCGTGG CCGAACAGAC TCAGGGTGAG
CTGTACATCA TCGGTCCCGG CGTCTGTCTG GGCTATGTAA ACAATCCCGC GCTTACCGCC
GAGCGCTATG TGTGGCTGAC GAAGCCGGAT GGCCAGCTTA TGCGTGCCTA TCGCACCGGC
GACATCGCCA AGTGGACGGC TGACGGCATC GTCCTCAGCG GTCGTCGTGA TAATCAGGTG
AAGATTCGCG GCTTTCGGGT CGAGCCGGAA GAGATCGAGC ATTGCCTGCG TGACAGCGGA
CTGTATCGAC AGGTTGCCGT GGTGATCGAC AGACAGCGGC GAATTCTGGC GTTTCTCGCT
CAACCGTACC TTGAGCATGA CGAACAGGCA CTGAAAGCGC ATGTACAGCG CCTGCTGCCT
GATTACATGC ATCCCGCTGT CTACACGCTG TTGCCCGGCA TGCCATTCGC CAGTAACGGC
AAGGTCGATC GCAAAGCGCT TCTGGAAATC CCGCTGAGCT TTACCGGGCA GCACACTCGT
CGGCTGCCCG AGACTGAGCA GCAACAGGCG CTGCTGGGGC TATGGAGCGA GCTGCTGGAG
CTGCCGCCAG ACGATATCTC GACTGATGAC AGCTTTTTCA ATCTCGGTGG TCACTCGATC
CTGCTGTCGC GGCTGTTGCT GGGGGTTCGC GAACGCTTTG GGCGCAGCAT TCCGATCAAT
CGCTTTATCG AAGCACCGAC GGTGCTGACA CTGGCCAGCC TGATCGACAG CGACGGCACC
TCGGCGGGCG TCCTCAGTGC TCAGGCCCTG CGGGATGCCA ACCCGGACTT TCAGCTGGCT
ACATTGCCCG TCAGCAGGCT GGGTGATGTT CATAAAGTGA TTGTCACGGG TGCCAATGGC
TTTCTGGGTG TGCATATCGT CGAAGCGCTG CTCAACCGGG GGGCGACCGA GATCGCCTGC
CTGGTGCGCG AGGCTGCTGG ACAAAGCGCG CAGCAGCGTT TCGAGGATGC CCTGCGGGAA
AACCGTCTGG ACCACCTGGA CCTGAGTCGC GTGCAGGTCT ACCCCGCTGA CCTGACAAAG
CCTCGGTTGG GGCTCAGTGA AGCGGTGTAT GAGCGGCTGG ATCTCGAGTT TGGTGCGTTG
GTGCACAACG CTGCCAATGT GAACCATGTT CAGGACTATG AAAGCCTGGT CAAAGACAAT
GTCGCCCCGG TCTTTGAATG CCTCAAGCTG TGTGAAGGGC GCAGTAAAAA GATCTTCAAT
TTCGTGTCGA CGTTGTCTGC CTGCAGTGCC ATCGATGCCG CCGGTAATGT GCTTGAACAG
CCCGCTGCCA CGACCCCGCC GATCTACATC AAGAATGGCT ACAACCTCTC CAAATGGGTG
GCTGAGCGCA TCCTGCAATG TGCCCGGGAC CAAGGTGTGT GGGTGAACAT CTATCGCCCC
GGCAACATCG CCTTCAACAG CGTTACCGGC GTGTGTCAGC CACAGAAAAA CCGCTTGATG
CTGATGCTCA AGGGTTCGCT GCAACTGGGT CAGGTTCCGG CATTCGCCAT TAACTTCGAC
CTGATGCCGG TGGACTTTCT GGCGCGTTTC ATCGGCTTCC ATGCCAGCCG TTACCAGCCA
GAACACGCGG TGTTCAACCT GCATAACCCC GAGCCCTTGA GCTGGGGCGA CTACGTGCAC
GCCTTCCGCG AGGCAGGGCG TCAGTTCGAG CTGGTCAGCG TCGAGCAATG GCAGATGCAA
CTCAGGCGCG TCGACAGCCA GAACGCGCTG TTTGGCGTGC TGGGGTTCTA TCTGGACGGG
TTTGAAGAAG ACATCGGCGA TATCTCGATG ATCGAGCACC GCAACACCCT GAACGGCATT
CGTCGCATGG GCGAGCAATA CCCGCAAAAG ACTCCGGCGT TGCTGCGCAG GGGCTGCGAA
TACCTGAAAG AAATCGACTT CATCTGA
 
Protein sequence
MKRLEIVLIG HSLTLSELNS ELLDHGHGVR HLSDQQALDA LTVPDGGVLI EDGSLDLSEE 
QLNAFGHCTQ LRLRVGFSKA LDHGLPRLEL LCWHGAAEAR RLIVHKWLAV EESGNGRVLR
DAAVAAMVDL ATLQISRLSR DEDCLNGMTS VTPARSDRQH GLQAVDQLLF EHRFNQTDQP
HLLKLSETPI TERLEQALLT FAERPALSVR NRTLSYRQLH AHSLAIQSLL QPLLAHAKAG
TPAVIGICLH KSAELYAGIL AVLGCGAVYL PLDPGQPVQR QQYILENSGA MLLLHDGSHP
LAAAEFPALD IATVPVGDGA PTHVRVATDQ DAPCMALYTS GTTGQPKGVL LSQRNLSHFT
AWYAEHVSLS EHSRVLQFST LSFDSSIIDI FPTWLSGAEL VVPDEDQRRD PLQLVSALQQ
GITHAFLPPA LLSILPLDQP LGLEHVMTGG DVCEPHVIAQ LTRQCHFHNL YGPTEATVLV
TACEFGPSSS NRHLGRPIAN SQAWILDEQL QPVAEQTQGE LYIIGPGVCL GYVNNPALTA
ERYVWLTKPD GQLMRAYRTG DIAKWTADGI VLSGRRDNQV KIRGFRVEPE EIEHCLRDSG
LYRQVAVVID RQRRILAFLA QPYLEHDEQA LKAHVQRLLP DYMHPAVYTL LPGMPFASNG
KVDRKALLEI PLSFTGQHTR RLPETEQQQA LLGLWSELLE LPPDDISTDD SFFNLGGHSI
LLSRLLLGVR ERFGRSIPIN RFIEAPTVLT LASLIDSDGT SAGVLSAQAL RDANPDFQLA
TLPVSRLGDV HKVIVTGANG FLGVHIVEAL LNRGATEIAC LVREAAGQSA QQRFEDALRE
NRLDHLDLSR VQVYPADLTK PRLGLSEAVY ERLDLEFGAL VHNAANVNHV QDYESLVKDN
VAPVFECLKL CEGRSKKIFN FVSTLSACSA IDAAGNVLEQ PAATTPPIYI KNGYNLSKWV
AERILQCARD QGVWVNIYRP GNIAFNSVTG VCQPQKNRLM LMLKGSLQLG QVPAFAINFD
LMPVDFLARF IGFHASRYQP EHAVFNLHNP EPLSWGDYVH AFREAGRQFE LVSVEQWQMQ
LRRVDSQNAL FGVLGFYLDG FEEDIGDISM IEHRNTLNGI RRMGEQYPQK TPALLRRGCE
YLKEIDFI