Gene Psyr_5009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5009 
Symbol 
ID3370561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5941892 
End bp5942668 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content60% 
IMG OID637655378 
Producthypothetical protein 
Protein accessionYP_238074 
Protein GI66048233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.22828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTGTG AAAAAACACT GCTCGCACAC AAGAAAGTTG AACTTGGCCG TCATCCGATC 
TTTGCAGAAA TCACCACACT GGATGTACTC CGACGTTTTA TGGAAACCCA TGTATTCGCC
GTCTGGGATT TCATGTCGCT GACCAAGCGC CTGCAACAGG AACTGACCTG CACCCAATTG
CCGTGGTTGC CGCCGACAGA TGCTTCCGCT GCCCGCCTGA TCAACGAGAT CGTGCTGGGG
GAGGAGTCCG ATGACCGACT GGGCGCGGGT CATTACAGCC ACTTCGAGCT GTACCTGGAT
GCGATGCGCG AGATTGGCGC GAGCACGGTA CAGATCGAGC GCTTCATCGA ACTGCAGAGA
CAGGGCATGC GTTACACCAC TGCGCTGCAA CACGTCGACG CGGGACAGGC GGCGACGGCA
TTCGTGACAC ACACGCTCGA CATCGCCCTG CATGCGCCGG CACACAGCGT TGCTGCGGCC
TTTCTGCATG GTCGCGAGAG TGTCATCCCG CTGATGTTCC AGACCATCCT CGATGACTGG
GGCATCACCG CCGACCAGGC ACCCACCTTC CGCTACTACC TGGAGCGCCA CATCGAAGTG
GACGCTGAAG ATCACGGCCC GGCAGCAGAG CAGTTGCTGG CTCGTCTGGT TGCTGGCGAC
ACGCAGCGCG AACGAGAGGT TTATCAGACC GCCATCGCGG CTGTGGAAAG CAGGATCCGG
CTATGGGACA CGCTGCGCCT GAGCATGCGA ACGCCGCGCA TGCAGGCCAG CGCGTAG
 
Protein sequence
MLCEKTLLAH KKVELGRHPI FAEITTLDVL RRFMETHVFA VWDFMSLTKR LQQELTCTQL 
PWLPPTDASA ARLINEIVLG EESDDRLGAG HYSHFELYLD AMREIGASTV QIERFIELQR
QGMRYTTALQ HVDAGQAATA FVTHTLDIAL HAPAHSVAAA FLHGRESVIP LMFQTILDDW
GITADQAPTF RYYLERHIEV DAEDHGPAAE QLLARLVAGD TQREREVYQT AIAAVESRIR
LWDTLRLSMR TPRMQASA