Gene Psyr_5002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5002 
Symbol 
ID3370554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5932816 
End bp5933298 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content64% 
IMG OID637655371 
Producthypothetical protein 
Protein accessionYP_238067 
Protein GI66048226 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.831976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCT CTTCTGACAC CCTGCGCCGT ACGCTGGTGA TCTGGCTGTA TGCCGTCGCA 
GTTGCGCATG TGCTGGGCAG TCTGGTGTTC ACCTGGGCAG GCTTTTCCGG CTTGCTCGAT
GGCTATCTGA CTAGCCTCGA GCAGGCGTTC TGGACCGAGG CGGTTCCCGC CGCTGCCCGC
GCGCAACAGG TCTGGTGGAT GGCGCTGTTC GGCGCGACGC TGCAAACGTA TTCCGTGTAC
ATGCTGGCGC TGGTGCACCT GGGCAACCGT CTGAAAAGTG CCGTGCCCTG GGGCTGGCTG
ATTGCGGGCC TGCTGCTGTG GGCGCCTCAG GACATCCTGA TTTCCGTGCG TGGGGGCGTT
TGGTCGCACG TGTGGCTCGA TCTGGCGGCG CTGCTGGCGT TGTTGCCGCC GCTGATCTGG
CTGTATCGCC ATGATCGCCG CACTTCGGCT GTTTACGCGT CGAAGGACCC TCGTCATGTC
TGA
 
Protein sequence
MPLSSDTLRR TLVIWLYAVA VAHVLGSLVF TWAGFSGLLD GYLTSLEQAF WTEAVPAAAR 
AQQVWWMALF GATLQTYSVY MLALVHLGNR LKSAVPWGWL IAGLLLWAPQ DILISVRGGV
WSHVWLDLAA LLALLPPLIW LYRHDRRTSA VYASKDPRHV