Gene Psyr_4994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4994 
Symbol 
ID3370546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5924150 
End bp5924563 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content57% 
IMG OID637655363 
Productrhs-related protein 
Protein accessionYP_238059 
Protein GI66048218 
COG category 
COG ID 
TIGRFAM ID[TIGR01643] YD repeat (two copies) 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGGCGC GCAACACCGG TCGCGTGGTC GATGGCGAAG AGTTCCGCTA CGACGCTGCG 
GCCAACCGCC TCAACTTCAA CACCAGCCGC TTCGATCACG TCAAAGACAA CCGCCTCAAA
CAGTGGGCGA ACCACGAATA CAAATACGAC GCCTGGGGCA ACCTGATCGA AAAAGTCGTC
GGCATCGTGC GCTGGCAGAC CTTCACCTAC GACTGCGAAA ACCGTCTGGT CAAAACCGAG
ACCATGGCTG ACACGCAGGT GGAAAGCACC AGTAGCTACC AATACGATAG TTTGGGCAGG
CGAGTCGCCA AACAGTCCGA GATCAAAGGC CAAACCGACC ACAAACGCTT TCTCTGGCAA
GGCCTGCGGA TGCTGCGTGA GGAAAGTCCG GGCCAGAGCA GCCTGTACCT CTAA
 
Protein sequence
MLARNTGRVV DGEEFRYDAA ANRLNFNTSR FDHVKDNRLK QWANHEYKYD AWGNLIEKVV 
GIVRWQTFTY DCENRLVKTE TMADTQVEST SSYQYDSLGR RVAKQSEIKG QTDHKRFLWQ
GLRMLREESP GQSSLYL