| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4965 |
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| Symbol | |
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| ID | 3370517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5889737 |
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| End bp | 5890255 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637655334 |
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| Product | hypothetical protein |
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| Protein accession | YP_238030 |
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| Protein GI | 66048189 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.537882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTTG ACGCATACAT CCAAATCGAT GGCATCCCAG GCGAAGTTCT GGACGACAAG
CACAAGGACT GGATCGAAGT GTTGGGCTAC GAGTTCGGCG CTACCCAGGC CACCTCGGCG
ACCGCCAGTT CTTCGGGCGG TGCTTCGTCC GAGCGCGTTG CACTGAGCGA CTTCAGCATC
CGCAAGTCTG TGGACAAGGC TTCCGCCAAG CTGTTCGAAG CGTGCTGCAA GGGCACTCAC
ATCGCCAAGA TCCAGCTGAA CGTCAACCGT GCAGGCGGCG ACAAGCTGAC CTACCTGACC
ATCAACCTGG AAGAAGTGGT TGTGTCTTCC GTGAAGGCGG TTGCTGGCGG TAGCCAGAAA
GGCGAAGACA ACGCAGTCAG CGATCTGCCG ATTGAAGAAA TCAGCTTCAA CTTCGCTCGC
ATCAAGACCA CCTACACCCA GCAGAGCCGT TCCGATGGCC AGGGTGGCGG TAACGTCACT
GGCGGCTGGG ACCGCACTGC GAACAAAGTA TTCGCATAA
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| Protein sequence | MAFDAYIQID GIPGEVLDDK HKDWIEVLGY EFGATQATSA TASSSGGASS ERVALSDFSI
RKSVDKASAK LFEACCKGTH IAKIQLNVNR AGGDKLTYLT INLEEVVVSS VKAVAGGSQK
GEDNAVSDLP IEEISFNFAR IKTTYTQQSR SDGQGGGNVT GGWDRTANKV FA
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