| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4958 |
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| Symbol | |
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| ID | 3370510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5876740 |
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| End bp | 5879343 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637655327 |
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| Product | AAA ATPase, central region:Clp, N terminal:Clp, N terminal |
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| Protein accession | YP_238023 |
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| Protein GI | 66048182 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCTGA AGTCCCTGTT CGCCAAGCTG AACGAAACGA GCCGCACTGC CACTGAAAGC
GCTGCTGCGC TGTGCCTGTC GGAGAACCAT TACGACGTTG AAGTCGAGCA CTTGCTGCTG
CAACTGCTCG ATAACAACGA CAACGATCTG CCAGTGATCC TGCGCCACTA CGATGTGGTG
CCTGATCGCC TGCAGGCACA GTTGGTCACT GCGCTGGGGA CGTTCAAGAA AGGCAACACG
CGGACGCCTG CGCTCTCGCC GCACATCACG CGCATGATCG AGCAGGCTTG GGTGCTGGCA
TCGATCGAGT TCGGTCAGTC ACAGATCCGT ACCGGCCATC TTGTGCAGGC CTTGCTGGAT
GACGATGCAC TGCGTCGCGT GGTCATCGGC TCGGCGCCGG AGCTGGAGAA GATCAACGCT
GACGACCTGC GCCTGAACAT GAGCGCGCTG GTCGAGGGCA GCCCCGAGAC CAAGCTGAGC
AAGCCACTGG CGAACGCCGA CGCCAGCACG GGCGCCACCA CCAAAGGTAA CGGCAAGACG
CCAGCCCTGG ACCAGTACAC CGTCAACCTG ACCCAGAGCG CTCGCGATGG TCGCATTGAC
CCGGTGCTGG GACGCGAATT CGAAGTGCGG CAGATGGTCG ACATCCTGAC CCGCCGCCGC
CAGAACAACC CGATCCTGAC CGGTGAAGCC GGCGTCGGTA AAACAGCCGT GGTGGAAGGC
CTGGCGCTGC GCATTGTGCA GGGCGACGTG CCGTCGGTGC TCAAGGGCGT TGCCATTCAC
ACGCTGGATC TGGGCCTGTT GCAGGCCGGT GCCGGGGTCA AGGGCGAGTT CGAAAACCGC
CTCAAGTCGG TCATCGAAGA AACCAAACGC AGCCTGCACC CGATCATTCT GTTTATCGAT
GAAGCCCACA CGCTGATCGG TTCGGGCGGG CAAGCCGGGC AGAACGATGC CGCCAACCTG
CTCAAGCCTG CCTTGGCACG CGGTGAGCTG CGCACCATCG CCGCCACAAC CTGGGCCGAG
TACAAAAAGT ATTTCGAGAA GGATGCCGCA CTGGCTCGAC GCTTCCAGGT GGTGAAAGTC
GAAGAGCCTG ACGAAGACAA GGCCATCCAC ATGCTTCGCG GGTTGCTGGC GAAGATGCAG
GAACACCACA AGGTCACGGT GATGGATGAA GCGCTGGTGC AGGCCGTGCG CCTGTCCAAC
CGCTACATCA CCGGCCGCCA GTTGCCGGAC AAGGCAGTCA GCGTACTCGA CACCGCTTGC
GCACGCGTTG CCCTGGGCCA GTCGGCACAG CCGGGAGCGC TGGAGGACTG CAAGCGTCAC
ATCGACAACC TGAACGCGGA AATCACCGTA CTGGAGCAGG AAACCGCCAA GGGCAGCGAC
CACGCTCGGC GTCTGACGGC CCTGCACGAA GAGCTGCAGG CCGAACAGGA GACCCGCGAG
TCGCTGGAGC AACAGTGGAA GCGCGAGCTG GAGCTGGTCG AGAAGCTTGG CGCACTCAGC
GTTCCGCAAA GCGGCGAGCC TGATGCCGGG CAGATTGCCG CCGTACGCGC CGAACTAGCC
AGCGTGCAGG GCGAGCAACC GCTGGTCCAC GCACTGGTCG ATGGCGGCAC GATTGGCGAA
GTGATTTCCG GCTGGACCGG CATTCCGCTG GGCAAGATGC TGCGCGACGA AATCGACACC
GTGCAGAGCC TGCCCGCGCT GCTGGGCGAA CGCGTACTGG GTCAGGACCA TGCACTCGAA
GAAATCGGCA AGCGCATCAA GATTTCCCGT GCCCGCATGG AAGACCCGAA CAAGCCGATC
GGCGTGTTCC TGCTGCTGGG CCCGAGCGGC GTCGGCAAGA CCGAAACGGC ACTGGCCCTG
GCTGACACGC TGTATGGCGG CGAACGTAAC GTCATCACCA TCAACATGTC CGAATACCAG
GAAGCCCACA CCGTCTCCAG CCTGAAAGGC TCACCGCCTG GCTACGTCGG TTACGGCGAA
GGTGGCGTGC TCACCGAAGC CGTACGCCGC AAGCCTTATA GCGTGGTGCT GCTCGACGAG
GTGGAGAAAG CCCACCCGGA TGTGCTCGAG CTGTTTTTCC AGGTCTTCGA CAAAGGCGTG
CTGGACGATG GCGAAGGTCG CGAGATCAAC TTCCGCAACA CCGTGATCAT CCTCACCTCC
AACACCGGCA CTGATCGCAT CATGCAGTGG TGCCTGAACA CAGAGCAGAA GCCGACCCCC
GATGACATCG TGGAAGGCCT GCGCGACGAG CTGAATCAGG TGTTCAAACC GGCCTTCCTG
GGTCGCCTGA CCATCGTGCC GTATTACCCG GTACAGGACG CGATTCTGGA GCGCATCGTC
GGCCTGAAGC TGGAGCGCAT TCGCAAGCGT TTCGAGCGCA ATCATCAGGC GGTGCTGCGT
TACGACGAAG CACTGATAAA GGCTATCGCG TCGCGCTGCA CGGAAGTCGA CAGCGGCGCG
CGCAATATCG ACAACATCCT GTCCAAGACC CTCATGCCGG AGCTCGCTCA GCGGGTACTG
GAGCGGATGG CGCAGGACAA GCCGATTCAG AGCCTGACCA TCGACCTGGG CAGCGATGGC
GACTTCGCTT ACACCCTGAC CTGA
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| Protein sequence | MNLKSLFAKL NETSRTATES AAALCLSENH YDVEVEHLLL QLLDNNDNDL PVILRHYDVV
PDRLQAQLVT ALGTFKKGNT RTPALSPHIT RMIEQAWVLA SIEFGQSQIR TGHLVQALLD
DDALRRVVIG SAPELEKINA DDLRLNMSAL VEGSPETKLS KPLANADAST GATTKGNGKT
PALDQYTVNL TQSARDGRID PVLGREFEVR QMVDILTRRR QNNPILTGEA GVGKTAVVEG
LALRIVQGDV PSVLKGVAIH TLDLGLLQAG AGVKGEFENR LKSVIEETKR SLHPIILFID
EAHTLIGSGG QAGQNDAANL LKPALARGEL RTIAATTWAE YKKYFEKDAA LARRFQVVKV
EEPDEDKAIH MLRGLLAKMQ EHHKVTVMDE ALVQAVRLSN RYITGRQLPD KAVSVLDTAC
ARVALGQSAQ PGALEDCKRH IDNLNAEITV LEQETAKGSD HARRLTALHE ELQAEQETRE
SLEQQWKREL ELVEKLGALS VPQSGEPDAG QIAAVRAELA SVQGEQPLVH ALVDGGTIGE
VISGWTGIPL GKMLRDEIDT VQSLPALLGE RVLGQDHALE EIGKRIKISR ARMEDPNKPI
GVFLLLGPSG VGKTETALAL ADTLYGGERN VITINMSEYQ EAHTVSSLKG SPPGYVGYGE
GGVLTEAVRR KPYSVVLLDE VEKAHPDVLE LFFQVFDKGV LDDGEGREIN FRNTVIILTS
NTGTDRIMQW CLNTEQKPTP DDIVEGLRDE LNQVFKPAFL GRLTIVPYYP VQDAILERIV
GLKLERIRKR FERNHQAVLR YDEALIKAIA SRCTEVDSGA RNIDNILSKT LMPELAQRVL
ERMAQDKPIQ SLTIDLGSDG DFAYTLT
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